Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr6g0545 ATGGCTTTAGAAGAAAAAGAAGAAGCAATTGTAGTTGTCAACATGGAGAACATACAACAACAACAACAAGAGCATGTTTCTGATCATCCTATACTCCAAGGGCAGAAACAACCTTCGTTTCGAAGAAACGATTCTCTTGAAATAGAAGCTCGCACCACCTCCCACGCTCGTCATTCTAAAGGGCCATCAACTGCGATGATACTACAACTAGCATTTCAAAGTCTCGGAATAGTTTACGGAGACATTGGAACCTCGCCGTTGTATGTCTATTCAAGCACTTTCACTCACGGTATAAAACACAATGATGATATATTGGGAGTTCTTTCATTAATCTTTTATACCCTCACTCTCATCCCTCTTCTCAAATATGTCTTCTTCGTCTTAAGGGCCACTGATAATGGCGATGGTGGAACATTTGCTTTGTACTCTCTGATATGTCGTTACGCGAGAGTGGGATTAATTCCGAATCGACAAGCAGAGGATGCAGATGTGTCGAATTATCAGCTGGAATTGCCAAACAACCGCGAGAAGAGAGCATCAAAGCTTAAATCTATGCTTGAGAATAATCACTTTATGAAGCTATTCCTCTTATTTGCTACTATGCTTGGCACTTCCATGGTCATTGGTGATGGTGTTCTCACCCCTTGCATCTCTGTTTTATCAGCTGTGGGAGGGATCAAGGAAGCTGCGAACCAAATAACCGAAAATCAAATTGTTTTGATATCAGTAGCAATCTTGATTGGCCTTTTCATGGTTCAGAGGTTTGGAACTGATAAAGTCGGTTACAGTTTTGCTCCAATAATCTGTATATGGTTTGCATTTATCGGAGGTATTGGCATGTACAATTTCATCAAACATGATACATCAGTCGTAAAAGCAATAAATCCAAAATATATAGTAGATTATTTCACTAGGAATAAGAAAGATGCTTGGATTTCTCTCGGCGGTGTTGTTCTAGCTATAACAGGAACTGAAGCACTATTTGCAGATTGTGGACATTTCACGGTTCGGTCTATACAGATAAGTATGTGTTCTGTGACTTACCCTGCTCTCATTTTGGCTTATGTTGGACAAGCTTCCTTTCTTCGCAAAAACAACGATCTTGTCGGTGACACATTTTACAAGTCCATACCAGACTCTCTATATTGGCCAATGTTTGTGATTGCTGTTTTAGCAGCAATAATAGCTTCTCAAGCTATGATATCAGGGACATTCTCTATAATCCAACAATCTCTATCATTAGGATGTTTTCCTCGAGTGCGAATTGTACATACATCAGCCAAATATGAAGGACAAGTTTATATCCCAGAAGTTAATTACATCCTCATGATTGCTTGTATTGCTATCACGGTTGGCTTCAAAAACACAACAAAAATTGGCAATGCTTATGGGATAGCAGTGGTATTTGTGATGACACTGACATCGGCTTTTCTCGTACTAATCATGATCATGATATGGAAGACTCACATACTTTTGATCCTTACCTATGTTCTCGTCATTGGTTCAGTAGAGCTTGTTTATTTAAGCTCAGTTTTATACAAATTTGAACAAGGAGGTTATCTACCTCTTGCATTTGCCGCGATTCTAATGTTCATCATGTATGTTTGGAATAATGTGTATCAAAGGAAATACTATTATGAACTTGATCACAAGATTTCCCCGGAAAAGCTTAGAGAGGTTGCTTGTGACACAAGTTTATCTCGATTACCCGGTCTTGCAATGTTTTACTCTGAGCTTGTTCAAGGTATTCCACCTATTTTCAAGCATTATGTTGCAAATGTTCCTGCACTACACTCTGTCCTTGTCTTTGTTTCCATAAAATCCTTACCTATTAGCAAAGTTCCAACGGAAGAAAGGTTCCTTTTTCGTCGAGTACATCCTAAAGAACTCAATGTATTCCGATGTGCTGTTAGATATGGATACACCGATGTACGCAATGAGCAAGAGCCTTTTGAGAAGATTTTGGTTGAGAGGTTGAAGGAGTTTATAGTTAAGGAATATTATTGTTCTCAAAAATTGATACAAGATGGTAAAAATGATGAAAGTGAAGATGATAAGATTGATGAAATTAGTGATGGAGAAAGAGTACAAGAGGAAATCGAAAAAGAGATTGAGGTGGTTGAAAAAGCATCAAGGGCTGGTATTGTTCATTTGATTGGTGAAAATGAGGTGATTGCTAGTAAAGGAGCTGGCATTGCAAAGAGGATTTTGATTGATTATGCTTACAATTTCTTGAAGAAAAACTTGAGACAAAGTGAAAAATTATTTGATATTCCTCACAAGCATATGGTTAAAGTGGGAATGACTTATGAACTATGA 2319 0.3803 MALEEKEEAIVVVNMENIQQQQQEHVSDHPILQGQKQPSFRRNDSLEIEARTTSHARHSKGPSTAMILQLAFQSLGIVYGDIGTSPLYVYSSTFTHGIKHNDDILGVLSLIFYTLTLIPLLKYVFFVLRATDNGDGGTFALYSLICRYARVGLIPNRQAEDADVSNYQLELPNNREKRASKLKSMLENNHFMKLFLLFATMLGTSMVIGDGVLTPCISVLSAVGGIKEAANQITENQIVLISVAILIGLFMVQRFGTDKVGYSFAPIICIWFAFIGGIGMYNFIKHDTSVVKAINPKYIVDYFTRNKKDAWISLGGVVLAITGTEALFADCGHFTVRSIQISMCSVTYPALILAYVGQASFLRKNNDLVGDTFYKSIPDSLYWPMFVIAVLAAIIASQAMISGTFSIIQQSLSLGCFPRVRIVHTSAKYEGQVYIPEVNYILMIACIAITVGFKNTTKIGNAYGIAVVFVMTLTSAFLVLIMIMIWKTHILLILTYVLVIGSVELVYLSSVLYKFEQGGYLPLAFAAILMFIMYVWNNVYQRKYYYELDHKISPEKLREVACDTSLSRLPGLAMFYSELVQGIPPIFKHYVANVPALHSVLVFVSIKSLPISKVPTEERFLFRRVHPKELNVFRCAVRYGYTDVRNEQEPFEKILVERLKEFIVKEYYCSQKLIQDGKNDESEDDKIDEISDGERVQEEIEKEIEVVEKASRAGIVHLIGENEVIASKGAGIAKRILIDYAYNFLKKNLRQSEKLFDIPHKHMVKVGMTYEL* 773
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr6g0545 772 PANTHER POTASSIUM TRANSPORTER 32 771 - -
Tpr6g0545 772 Pfam K+ potassium transporter 71 643 IPR003855 GO:0015079|GO:0016020|GO:0071805
Tpr6g0545 772 PANTHER OSMOTIC STRESS POTASSIUM TRANSPORTER 32 771 IPR003855 GO:0015079|GO:0016020|GO:0071805
Tpr6g0545 772 TIGRFAM kup: potassium uptake protein 70 771 IPR003855 GO:0015079|GO:0016020|GO:0071805
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr6g0545 Tpr-Chr6 4401306 4405088 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr6g0545 19 772 Inorganic Solute Cotransporters AT4G13420 53.316 0.0 847
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr6g0545 K03549 - pop:7491314 1135.17