Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr6g0544 ATGAAGAAAAAAACCCCTAAAACAACTACAAAGGGAAGAAGTAAGAAGTTACCACTAAGTGCGAGTAACACCAGACAGTTACAGCTTCAGCTCAGTAAATTCTCTCTCACACAATACAAGCCATTATTACCAACAACTTCTTCCACCATTTCTCGCTTCCAGAATCTTCTAGATTCAGAAGCCATTGAAAACCCTTCCTCTTGTGTTAGGGTTACGAATGATGCTACTGAAGCAGATCAAAGAGATTTCATTCTCAGTCAAGATTTCTTCTGTACGCCAGATTATATAACACCGGATAATCAGAGAATTTTGAATGGTTTGGATTTCAATAAGGATAATAGTCCTTGCCCTAAATCGCCGGAGAAATTGAATACTACTAAAAGCAAGAGATGTCGATTGGACGGTGTATCGGTAAACCCTCTTAGCCCTACGTATTCTAGTGACCATCAACAAGTTGTGGAACTTGGTAAGGACTCTGTTGCCGAGGAAGAAGCTGTTGATATAACGATAGCTTCTGGTAAGCCGAAGGTCCAGAATTATGTGTCACATTCTGCAGCTGCATTGCGTTGTCGGGCCATGCCTCCTCCTTGCATCAGTAACCCCTATTTAAAAGACGTTTCACAAAAGGAAACCAAGGATCCCTTTGCAAACCAAAGATCCAAATGTGCAGGTCTCTTCCCTAAATTTACAGCCGTGGACGGGCTCTCCCGTTATCGCACAGACTTTCACGAGATTGAGCAAATTGGTAGAGGGAACTTTAGTTGTGTTTTCAAAGTATTAAAGCGAATAGATGGCTGCTTGTATGCCGTGAAACGCAGCACAAGACAGTTACAGCTGGAAACAGAAAGAAAAAAAGCTTTGATGGAAGTCCAAGCTTTGGCAGCCTTGGGTTCTCATGAGAACATTGTGGGTTATTACACTTCATGGTTTGAAAATGAACAGCTGTACATTCAGATGGAGATTTGTGATCATAGCTTATCCGTAAAGAAAGGCTCTGAGTTCTTAGCAGAAGGTCAAGTGTTAAAAGCTTTTTATCAGGTTGCCAATGCGCTGCGATTTATGCACGAGAAAGGAATAGCTCATCTTGATGTTAAACCTGATAATATTTATGTCAAAAATGGTGTTTATAAGCTTGGTGATTTTGGATGTGCTACTCTTATAGATAGTAGCCTGCCAATTGAGGAAGGAGATGCTCGTTATATGCCCCAGGAAATCCTTAACGACAATTATGATCACCTTGACAAGGTTGATATTTTCTCCTTGGGAGCTTCTATTTATGAACTTGTTCGAAAATCGCCTTTGCCAGAATCAGGAGGTCATTTTTTGAATCTTAAAGAGGGCAAGTTACCACTCCTGCCCGGTCATTCATTACAATTCCAAAACTTGCTCAAGGCCATGATCGATCCTGATCCAGTCAAGAGGCCTTCTGCCAGAGAGTTAGTAGAGAACCCAATTTTCGACAGGGTCTTGAGAACCGCTAAAAATTGA 1488 0.4133 MKKKTPKTTTKGRSKKLPLSASNTRQLQLQLSKFSLTQYKPLLPTTSSTISRFQNLLDSEAIENPSSCVRVTNDATEADQRDFILSQDFFCTPDYITPDNQRILNGLDFNKDNSPCPKSPEKLNTTKSKRCRLDGVSVNPLSPTYSSDHQQVVELGKDSVAEEEAVDITIASGKPKVQNYVSHSAAALRCRAMPPPCISNPYLKDVSQKETKDPFANQRSKCAGLFPKFTAVDGLSRYRTDFHEIEQIGRGNFSCVFKVLKRIDGCLYAVKRSTRQLQLETERKKALMEVQALAALGSHENIVGYYTSWFENEQLYIQMEICDHSLSVKKGSEFLAEGQVLKAFYQVANALRFMHEKGIAHLDVKPDNIYVKNGVYKLGDFGCATLIDSSLPIEEGDARYMPQEILNDNYDHLDKVDIFSLGASIYELVRKSPLPESGGHFLNLKEGKLPLLPGHSLQFQNLLKAMIDPDPVKRPSARELVENPIFDRVLRTAKN* 496
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr6g0544 495 SUPERFAMILY Protein kinase-like (PK-like) 232 488 IPR011009 -
Tpr6g0544 495 ProSiteProfiles Protein kinase domain profile. 242 486 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr6g0544 495 Gene3D Phosphorylase Kinase; domain 1 231 321 - -
Tpr6g0544 495 SMART serkin_6 242 486 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr6g0544 495 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 2-ALPHA KINASE EIF2-ALPHA KINASE -RELATED 413 489 - -
Tpr6g0544 495 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 2-ALPHA KINASE EIF2-ALPHA KINASE -RELATED 53 400 - -
Tpr6g0544 495 Pfam Protein kinase domain 242 486 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr6g0544 495 ProSitePatterns Serine/Threonine protein kinases active-site signature. 359 371 IPR008271 GO:0004672|GO:0006468
Tpr6g0544 495 ProSitePatterns Protein kinases ATP-binding region signature. 248 271 IPR017441 GO:0005524
Tpr6g0544 495 Gene3D Transferase(Phosphotransferase) domain 1 322 490 - -
Tpr6g0544 495 MobiDBLite consensus disorder prediction 1 23 - -
Tpr6g0544 495 PANTHER BNAA08G27310D PROTEIN 413 489 - -
Tpr6g0544 495 PANTHER BNAA08G27310D PROTEIN 53 400 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr6g0544 Tpr-Chr6 4393731 4397518 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr6g0544 2 489 Core Cell Cycle Gene Families AT1G02970 59.356 0.0 592
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK WEE Tpr6g0544 Pkinase 3.3e-49 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr6g0544 K06632 - gmx:547742 729.939