Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr6g0522 ATGATCATAACATTACGCCTTATTTTACTAGCCATATTTGTTTCACTCTCAACAAATACTAGCCATGTTGTAGATGCAAAAAGAAACTGCGGCAATAATGTTAAGGAAGCTTGCAGTGTCACAAGGTACAAAAATCTTTGCATCCACACACTATCACAATTCTCCAACACAGCAGGAAGAACCCCAAGCAAATGGGCACGCGCGGGAGTGTCGGTAACAATAGGCGAAGTTAAGAATGTTCAAGCATATCTTACAAAATTAAAGAGGAATGGAAATTTGAAAGGAAGAAACAAAGTTGCGCTTTCGGATTGTATTGAAACTTTTTGCTATGCACTTGATGATCTTCACAAATCACTCGGTGTGCTTAGGAAGCTAAGCAAACGCACGTTTAACACACAAATGGGGGATCTTAATACATGGATTAGCGCGGCACTTACCGATGAAGATACTTGTCTTGATGGATTTGAAGGAAAAAGTGGAAAGCAAATTAAATTGCTGCAAAATAAGGTTCATAATGTTTCTTACCTAACAAGCAACGCTCTTGCTCTTGTCAACAAACTTGCTTCTACGGGTCTCGGAACCATCACTGATCCATAG 597 0.3953 MIITLRLILLAIFVSLSTNTSHVVDAKRNCGNNVKEACSVTRYKNLCIHTLSQFSNTAGRTPSKWARAGVSVTIGEVKNVQAYLTKLKRNGNLKGRNKVALSDCIETFCYALDDLHKSLGVLRKLSKRTFNTQMGDLNTWISAALTDEDTCLDGFEGKSGKQIKLLQNKVHNVSYLTSNALALVNKLASTGLGTITDP* 199
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr6g0522 198 SMART PMEI_2 29 183 IPR006501 GO:0004857
Tpr6g0522 198 TIGRFAM PME_inhib: pectinesterase inhibitor domain 5 187 IPR006501 GO:0004857
Tpr6g0522 198 PANTHER PECTINESTERASE INHIBITOR-LIKE 14 182 - -
Tpr6g0522 198 Gene3D Invertase/pectin methylesterase inhibitor family protein 31 189 IPR035513 -
Tpr6g0522 198 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 32 188 IPR035513 -
Tpr6g0522 198 CDD PMEI-like_3 37 189 - -
Tpr6g0522 198 PANTHER PLANT INVERTASE/PECTIN METHYLESTERASE INHIBITOR SUPERFAMILY PROTEIN 14 182 - -
Tpr6g0522 198 Pfam Plant invertase/pectin methylesterase inhibitor 33 183 IPR006501 GO:0004857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr6g0522 Tpr-Chr6 4273694 4274769 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr6g0522 34 192 Carbohydrate Esterase AT3G14310 35.366 1.85e-21 89.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr6g0522 - - gmx:100791264 276.559