Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr6g0506 ATGGCCTTCAAAAAAATTTCCTTCCTTACACTCTTCTTTTCTCTCTCACTTTTCATCTTAACATCATTACCATTATCATCTCTAGCTGATAATCCTAAGATCCCACCACAAAAAATATGCGACTCCACCGTAGACCCTACCTTTTGCAAAACACTACTTGCTAATCAAAACGGCACCGTAATTGACTATGGTCGATTTTCTATCCGAAAATCCTTATCTCAATCAAGAAATTTATTAAACTTAGTAAATTCACATCTTCAAAATAAATCATCTTTGTCACAATCCACAATTTCAGCTCTTCAAGATTGTCAATTTCTAGCTCAACAAAATTTTGAATATTTATCAAACACTCATCAAACTACTAATAGTACTAGCAATGTTCTTTCCATTTCTCAAAGTGAAGAATTTCAAACAATTCTTAGTGCTGTTTTAACTAATCAACAAACATGTTTAGATGGTTTAAGCAGCACAAATTCTGATCAAACGGCGATTAATGATTTAACGTCGACACTTTCAAATGATGCAAAGATTCATAGTGTGTCACTTGCTCTATTTTTAAAAGGTTGGGTTCGTGACAACAAAAAACAAACATCATGGCCACAAAATGGAAGACATTTGAATTTTCGTAACGGTCAATTACCGTTGAAAATGTCAAATGGAGTACATGCAATTTATGATTCAGCTAGAAATCGACATGGGAGAAAATTACTTCAAACAGTTGATGAAAGTGTTACGGTAAGTGAAATTGTGGTTGTTAATCAAGATGGAAGTGGAAATTTTACAACTATTAATGATGCTATAAACGTTGCACCAAATAACACGGTTGCTAGTAGTGGCTACTTTCTTATTTTTGTTACGGAGGGTGTGTATCAAGAGTATGTATCGATACCAAAAAATAAAAAGTATTTGATGATGGTCGGAGATGGTATTAATCGAACAATTATCACCGGTGATCACAATGTTGTTGATAACTTTACAACATTCAACTCAGCAACATTTGCTGTGGTGTCACAAGGTTTCTTAGCAGTCAACATGACATTCCGCAACACGGCCGGACCAGTCAAACACCAAGCCGTTGCAGTAAGAAACGGAGCTGATCTATCCACATTCTACAGCTGCAGTTTCGAAGGTTATCAAGACACATTATACACACATTCAATGAGACAATTTTATCGCGAATGTGACATCTATGGCACAGTTGACTTCATATTTGGTAACGCTGCAGTTGTTTTCCAAAATTGCAACTTATATCCCCGTCTTCCTAGTACCGGACAATTCAACGCTATAACCGCTCAAGGACGAACTGATCCAAATCAAAACACAGGAACTTCTATACATAATACAACTATAAAAGCCGCTGATGATTTAGCTCCGATGATCGGTACAGTTAAAACATACCTTGGTAGGCCATGGAAAGAGTACTCAAGGACAGTTTATTTGCAATGTTTTATGGACAGTTTGATAAATCCTTCTGGTTGGCGTGAATGGAGTGGAGATTTTGCATTAAGCACATTGTATTATGCAGAGTATAATAATACAGGACCTGGTTCGAATACGAGTTCGCGAGTGAGTTGGATCGGTTATCATGTTATTAATGCTACTGATGCTGCTAATTTTACTGTGTCTAACTTTTTGGATGGGGATAGTTGGTTGCCTCAAACTGGTGTTCCATACTCAAGTGGATTGATATAA 1692 0.3647 MAFKKISFLTLFFSLSLFILTSLPLSSLADNPKIPPQKICDSTVDPTFCKTLLANQNGTVIDYGRFSIRKSLSQSRNLLNLVNSHLQNKSSLSQSTISALQDCQFLAQQNFEYLSNTHQTTNSTSNVLSISQSEEFQTILSAVLTNQQTCLDGLSSTNSDQTAINDLTSTLSNDAKIHSVSLALFLKGWVRDNKKQTSWPQNGRHLNFRNGQLPLKMSNGVHAIYDSARNRHGRKLLQTVDESVTVSEIVVVNQDGSGNFTTINDAINVAPNNTVASSGYFLIFVTEGVYQEYVSIPKNKKYLMMVGDGINRTIITGDHNVVDNFTTFNSATFAVVSQGFLAVNMTFRNTAGPVKHQAVAVRNGADLSTFYSCSFEGYQDTLYTHSMRQFYRECDIYGTVDFIFGNAAVVFQNCNLYPRLPSTGQFNAITAQGRTDPNQNTGTSIHNTTIKAADDLAPMIGTVKTYLGRPWKEYSRTVYLQCFMDSLINPSGWREWSGDFALSTLYYAEYNNTGPGSNTSSRVSWIGYHVINATDAANFTVSNFLDGDSWLPQTGVPYSSGLI* 564
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr6g0506 563 PANTHER PECTINESTERASE 19 562 - -
Tpr6g0506 563 PANTHER PECTINESTERASE 19 562 - -
Tpr6g0506 563 CDD PMEI-like_3 39 189 - -
Tpr6g0506 563 Pfam Pectinesterase 250 548 IPR000070 GO:0030599|GO:0042545
Tpr6g0506 563 SUPERFAMILY Pectin lyase-like 245 561 IPR011050 -
Tpr6g0506 563 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 38 185 IPR035513 -
Tpr6g0506 563 Gene3D - 243 562 IPR012334 -
Tpr6g0506 563 Pfam Plant invertase/pectin methylesterase inhibitor 37 184 IPR006501 GO:0004857
Tpr6g0506 563 ProSitePatterns Pectinesterase signature 2. 396 405 IPR033131 -
Tpr6g0506 563 SMART PMEI_2 31 184 IPR006501 GO:0004857
Tpr6g0506 563 Gene3D Invertase/pectin methylesterase inhibitor family protein 37 187 IPR035513 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr6g0506 Tpr-Chr6 4169173 4171770 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr6g0506 5 563 Carbohydrate Esterase AT4G02330 60.622 0.0 680
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr6g0506 K01051 - gmx:100813051 858.596