Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr6g0497 ATGAGAACACAACTACAACAATTGTGTGTAGACAAAAAGGAGCAGGAACTAGAAGTTTGTGGAACTGAAATTTCGGGCCAATCAGGCTCGTCGAGCAGGAGTGAGCAGACGACTGGGATAGCTACCGGTGATAATGCTGCGTTCGAAGTAAACCATCTTGACATACATGACAATGATGCTGGATCTCGAGTTTGTCGACACAGTAGCAATAAGAAAAAGAAGTGCCAACAACGGGTGTCAGATGGAGGAGATACGAGTGGAATGGGGCTTCCCCAAGTTACCATGAAAGTGTTTGAAAAGATAGAAAGTAAGGGAAAAACAACTTTCAATGAGGTGGCAGATGAACTTGTGGCTGAACTTTCTGATCCAATGAATAGTGTTTTGTCCCCCGAGAAGTTTGTAGGTCTTAAGAACCTTGTTCAACGAAATGAGCAACTATATAGATCAGAAAATCCTCCCAGCGGAGGTTTATCTTTACCTTTTGTTCTGGTACAGACGCCTCCGCATGCAACTGTTGAACTTGAAGTGGAAATATCAGAAGACAATCAAGATATGCAACTTGTTCATTTTGATTTCAATAGTGCCCCTTTTCAACTGTATGACGACAATTATGTGCTCAAATCAATGGAATTTTGTGATAGACCTCGGAGTGATATTGTTATGCTCACGGAAGAAGGGGAAGTTTCTAGCTTGTCAGGCTTGAATCAGTTACAGGTTCCTCCTTCAGTTCCTGGAATACTAGAGAACAATACAATGGAGTCAAACAAAAGGCGTAGATGTGGTTCGAGTTTGACATTATCTGGTATTACTAATGTTACTTCTTCATCATTGCATTCACAAGTGTCCAGCAAAAATGTGTTTCGAAAACCTTTGCATATTGGACCTGGTAAATATGTTCTCAAGCGCCCCAGAAGCCCACATAGAATAGATGAAAGTTCTCAAATGAATTTCGACAAATCTAACAATAAGGAAATATATGTGGAATGCAACGAGAATGGCGAAGAGTATGATGTTCCTGATAATAATTCTGTGTCCAGCGAAAATGTGTTTCGAAAACCTTTGCATATTGGACCTGGTAAATATGTTCTCAAGCGCCCCAGAAGCCCACATAGAAGAGATGAAACTTCTCTAATGAATTTCGACATATCTAACAATAAGGAAATATATGTAGAATGCAACGAGAATGGCGAAGAATATGATGTTCCTGATAATCATTCTTTTTTTGGTTACATTCCTGATAATCATTCTGTTCAAGTTGTTACCTCACAATACTGGGACATTGGAGAACCAACATGCATTTGTGAGTACTGTGGTGCAATGATGTGGTCTGAAGAAAGACTGCGAAAGTCGTCTAAAGCAAAAAATCCAAAGTTTAATATGTGTTGCTTCCAAGGGAGGATTGTGATTCCTCATTACCATCCTCTTCCACAGCCACTGAATGATTTGTTTCACAAACATGACAAGAGAAGCAAATATTTTTTGGATAACATCAGATCATTCAATAGTATGTTTGCTTTCACATCTATGGGTGGGAAATTGAATAAGTCACTAAATGATGGAAATGCTACTCCAACTCTTCTCATGAATGGTGAAAACTATCATCAGATCGGAAGTTTGCTTCCACATCCAGGAATTCAGCCCAAGTTTGCTCAATTATATATTTATGACACTGAAAATGAAATAAGTAACAGAATGTCAGTTGTAAGTATGAAAGACAATAGCTCTTCATTGAAAGCAACAATTGTTGATGATATTAAGAAAGTTCTCGATAATCATAATCCATATGCTCAAACATATAGGATGATTCGAGACAAAATTTGTGAAAATGATGTTCCGACATTGAAGTTGAGAATATTAGGCAAGAGAGGACGTGATGGTAGGAGATACAATCTTCCAACAACATCAGAAGTTGCAGCTTTAATTGTTGGTGATTTTGATGCAGCCGACTTTGAGAGAGATATAATTTTGGAGACTCAGTCAGGTTTATTGAAACGTATCTCAGCATTTGAACCTGCATATTTGCCATTACAATATCCCATGCTCTTTCCTCGAGGAGAAGATGGATTTAGGAAGGACATCCAATACAATGATGATTCAAATGCACCTACAATAAAAAGACGAACAATTACTCTTCGAGAGTGGTTTGCTTATAGGATCCAGCAGAGGATTACTGAACAATCAACTTTATTGTTTTCTAGACGTTTATTCCATCAGTTTCTGGTGGATGCTTATAGTATGATTGAGTCTTCACGGTTGAAATGGATTAGAAATCATCAAAAAGATTTGAGAGTTGAGATGTACAAGGGTCTTACAGAGGCCATTCTTAGAGGGGAGATTACTCCGTCAACAGCTGGCAAGAGAATTGTGTTGCCGTCATCTTTTACCGGAGGAGCACGCTATATGATTCAAAACTACCAGGATGCTATGACAATATGTGGATGGGCTGGACATCCTGATTTGTTCATCACTTTTACTTGCAATCATAAGTGGCCAGAATTGTGTGGATTTTTGAGCAAATACAAACTAAAGTCGAAAGACCGACCAGATTTAGTTTGCAGACTTTTCAAAATTAAACTCGATCATTTGATAAAAGAGATAAAGGAAGGAGAAATCTTTGGCAAAGTTAAAGCAGTGATATACACAATCGAATTTCAAAAGCGTGGACTACCGCATGCTCACATACTGGTATTTTTGCACCCTGGTAGTAGGCATGTACATCCTCAAGATATAGACAGAATAATCTGTGCTGAGATTCCAGATAAACATAGTGATCCTAAACTATTTAATATAGTGTCTGCGCTTATGATTCATAGTCCATGTGGTGATCAGAATAAAAATTCTCCATGCATGCATAATGGAAAATGTACCAAATATTTTCCAAAGAGGTTTGTTGACAACACAATTATTGACGCAGATGGATATCCAGTATACAGAAGGCGAGATAATGGCGTGTTTATTAGAAAGGGCGAGTTTTTGGTTGATAATAGATTTGTAGTGCCATATAATAGACATCTGCTGTTGAAGTACAATTCTCATATTAATGTTGAATGGTGTAACCAGTCTCGATCTTTGAAGTATTTGTTTAAATTTGTCAACAAAGGGCATGATCGTGTCACTGCAGGCTTCTATAACAATGATTCTAAATATGATGACGAAATAAAGTTGTATTATGATTGTAGATATTTGTCATCCTATGAAGCAGTTTGGAGAATTTTTACTTTTGACATTAACTACAAAAAACCTTCAGTGGAGAGGTTAACCTTCCATTTGCCAGGTGAACAACCAGTTGTTTTTGACGACGTTGATCCAATTAATGAGGTTGTCAATAAGCCATTTATTCATAATACCAAGTTTTTGGCGTGGATGGATGCAAATAAGAAGTATGAGGAAGCTAAGAATCTTACTTACAATCAATTTCCTCTGAAATTTGTTTGGAAAGATTCTGAACGTCAATGGTATCCCCGAAAAAAAGGTCATAAAATTGGAAGACTTCACTTTGTACCACCTGGAATTGGTGAGATATATTATCTCAGGACTTTGCTTAATTATGTTAAAGGCCCTCGATCATTTGCTGAAATAAGGACAGTGAACAATGTTCATTATCCGACATTCAAGGAGGCTTGCTATGCGATGAGTTTGTTAGATGATGACAAAGAGTACATAGATGCCATTATGGAGGCAAGCCATTGGGGTACAGGAAGTAATTTACGGGAGCTATTTGCAAATTATTTGTTGTCAAATCAGTTTTCTAGACCTGAATTTGTTTGGAACGAGACTTGGGAGTATTTGACTGATGACATATTGAGCACACAAAGAATGCTTCTTCAATTGCAAGATTTGGTTTTATCTCCAACAGAGTTGAAGATCTTCGCATTGTCAGAGATTGAAAAATTGCTACAAAGCAATCACAAGAGTCTGTCAGACTTTCCTACAATGCCGCAGCCAGACTTGTCAATGATTACTGCAAGAGAAAATAGGCTCATATATGATGAGCTAAATTATGACAGACACTCTTTGGTTGAAGAATACACTCGATTGATGTCAACCATGACTTCAGAACAAAGGAGAATATATGACAAGATAATGACACGAGTCACTGAAAATAAACCTGGATTGTTTTTTCTTTACGGTTATGGCGGCACAGGAAAAACTTATATTTGGAGGGCTATGTCAGCAGCATTACGCTCAAAGGGAGATATTGTTCTAACGGTTGCATCTAGTGGAATAGCTGCTTTGCTGATTCCTGGTGGAAGTACTGCACATTCAAGGTTTTCCATTCCTATACAAGTTGATGAAAACTCAACTTGCAATATTAAGCAAGGAAGCCCCTTAGCAGAACTAATAGTCAAGGCAAAGCTCATCATATGGGATGAAGCTCCAATGGCACACAAACATTGTTTTGAAGCTGTTGATAGAACCTTCAGGGATATCCTTCGATTTTGTGATAGTAGAAACATAAATCTTCCTTTTGGTGGAAAAGTTGTAGTCTTGGGAGGAAATTTTCGACAAATTTTGCCAGTTATACCAAAAGGAACGAGACAAGAAGTAGTTCATGCTACAATCAACTCCTCCTATCTTTGGGATTTTTGTGAAGTGATGACATTACATACAAACATGAGGCTACTAACTGATAGTTTAGATTCTGATTTTCAGCAAAGAAAGGAGTTCTCTGATTGGATCTTAGGAATTGGTGATGGTAATGTTGGGGAAGACAATGATGTGGATATAAGTGTTCAAATTCCCGATGATTTGCTTATAAAAAGCGCAGGTGACTCACTCACATCCATTGTTTATAGCACATATCCTTCATTCTTGGATAATATGAACGATCTTTCATTTTTTCAAGATAGGGCTATATTAGCTCCTAAGAATGACATTGTTGACAAGATCAATGATTACATGTTGGGCTTAATTCCTGGCGATCGAAAAACATATCTTAGTTTTGATTCTGCATACTCACCCAATTCAGATGTTGATAATCCAGATAATGTGCACACTACAGAATTTTTTAACACAATTAATGGTTTTGGACTTCCAAATCACATAGTGAAACTAAAAGTTGGGGTGCCAGTAATGTTATTGAGAAACATAAATCATTCTTCAGGATTATGCAATGGAACTCGACTAATCATTACAAGGATGGGAAAGTATGTTCTTGAAGGAAAAGTGATATCGGGAAGTAATCTTGGCCATAAGGTTTATATACCTAGATTATCGTTAACACCTGCTGATGTCAGAATTCCTTTCAAATTTCAAAGGAAGCAATTTCCTTTGACTCTTTCATTTGCAATGACTATTAATAAAAGTCAAGGGCAGTCGTTAAAGCATGTTGGGTTGTATCTTTCTTGTTCAGTTTTCTCACATGGTCAGCTATATGTGGCGCTTTCAAGAGTTACCTCGAGAAAAGGTTTGAAAATATTGGCAATTGATGATGAAAGTCAAGATACGAACATGACTGCAAATGTTGTTTATAAAGAAATATTTCAAAAATTATCTTAA 5499 0.3728 MRTQLQQLCVDKKEQELEVCGTEISGQSGSSSRSEQTTGIATGDNAAFEVNHLDIHDNDAGSRVCRHSSNKKKKCQQRVSDGGDTSGMGLPQVTMKVFEKIESKGKTTFNEVADELVAELSDPMNSVLSPEKFVGLKNLVQRNEQLYRSENPPSGGLSLPFVLVQTPPHATVELEVEISEDNQDMQLVHFDFNSAPFQLYDDNYVLKSMEFCDRPRSDIVMLTEEGEVSSLSGLNQLQVPPSVPGILENNTMESNKRRRCGSSLTLSGITNVTSSSLHSQVSSKNVFRKPLHIGPGKYVLKRPRSPHRIDESSQMNFDKSNNKEIYVECNENGEEYDVPDNNSVSSENVFRKPLHIGPGKYVLKRPRSPHRRDETSLMNFDISNNKEIYVECNENGEEYDVPDNHSFFGYIPDNHSVQVVTSQYWDIGEPTCICEYCGAMMWSEERLRKSSKAKNPKFNMCCFQGRIVIPHYHPLPQPLNDLFHKHDKRSKYFLDNIRSFNSMFAFTSMGGKLNKSLNDGNATPTLLMNGENYHQIGSLLPHPGIQPKFAQLYIYDTENEISNRMSVVSMKDNSSSLKATIVDDIKKVLDNHNPYAQTYRMIRDKICENDVPTLKLRILGKRGRDGRRYNLPTTSEVAALIVGDFDAADFERDIILETQSGLLKRISAFEPAYLPLQYPMLFPRGEDGFRKDIQYNDDSNAPTIKRRTITLREWFAYRIQQRITEQSTLLFSRRLFHQFLVDAYSMIESSRLKWIRNHQKDLRVEMYKGLTEAILRGEITPSTAGKRIVLPSSFTGGARYMIQNYQDAMTICGWAGHPDLFITFTCNHKWPELCGFLSKYKLKSKDRPDLVCRLFKIKLDHLIKEIKEGEIFGKVKAVIYTIEFQKRGLPHAHILVFLHPGSRHVHPQDIDRIICAEIPDKHSDPKLFNIVSALMIHSPCGDQNKNSPCMHNGKCTKYFPKRFVDNTIIDADGYPVYRRRDNGVFIRKGEFLVDNRFVVPYNRHLLLKYNSHINVEWCNQSRSLKYLFKFVNKGHDRVTAGFYNNDSKYDDEIKLYYDCRYLSSYEAVWRIFTFDINYKKPSVERLTFHLPGEQPVVFDDVDPINEVVNKPFIHNTKFLAWMDANKKYEEAKNLTYNQFPLKFVWKDSERQWYPRKKGHKIGRLHFVPPGIGEIYYLRTLLNYVKGPRSFAEIRTVNNVHYPTFKEACYAMSLLDDDKEYIDAIMEASHWGTGSNLRELFANYLLSNQFSRPEFVWNETWEYLTDDILSTQRMLLQLQDLVLSPTELKIFALSEIEKLLQSNHKSLSDFPTMPQPDLSMITARENRLIYDELNYDRHSLVEEYTRLMSTMTSEQRRIYDKIMTRVTENKPGLFFLYGYGGTGKTYIWRAMSAALRSKGDIVLTVASSGIAALLIPGGSTAHSRFSIPIQVDENSTCNIKQGSPLAELIVKAKLIIWDEAPMAHKHCFEAVDRTFRDILRFCDSRNINLPFGGKVVVLGGNFRQILPVIPKGTRQEVVHATINSSYLWDFCEVMTLHTNMRLLTDSLDSDFQQRKEFSDWILGIGDGNVGEDNDVDISVQIPDDLLIKSAGDSLTSIVYSTYPSFLDNMNDLSFFQDRAILAPKNDIVDKINDYMLGLIPGDRKTYLSFDSAYSPNSDVDNPDNVHTTEFFNTINGFGLPNHIVKLKVGVPVMLLRNINHSSGLCNGTRLIITRMGKYVLEGKVISGSNLGHKVYIPRLSLTPADVRIPFKFQRKQFPLTLSFAMTINKSQGQSLKHVGLYLSCSVFSHGQLYVALSRVTSRKGLKILAIDDESQDTNMTANVVYKEIFQKLS* 1833
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr6g0497 1832 Pfam PIF1-like helicase 1350 1713 IPR010285 GO:0000723|GO:0003678|GO:0006281
Tpr6g0497 1832 CDD SF1_C_RecD 1760 1804 - -
Tpr6g0497 1832 Gene3D Transcription factor DP 95 248 IPR038168 -
Tpr6g0497 1832 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1486 1830 IPR027417 -
Tpr6g0497 1832 PANTHER UNCHARACTERIZED 579 1788 - -
Tpr6g0497 1832 PANTHER ATP-DEPENDENT DNA HELICASE 579 1788 - -
Tpr6g0497 1832 SUPERFAMILY E2F-DP heterodimerization region 131 222 IPR037241 -
Tpr6g0497 1832 CDD DP_DD 131 209 IPR014889 -
Tpr6g0497 1832 Gene3D - 1347 1528 IPR027417 -
Tpr6g0497 1832 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1292 1538 IPR027417 -
Tpr6g0497 1832 Pfam Helitron helicase-like domain at N-terminus 714 896 IPR025476 -
Tpr6g0497 1832 SMART DP_2 111 259 IPR014889 -
Tpr6g0497 1832 Pfam Transcription factor DP 132 214 IPR014889 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr6g0497 Tpr-Chr6 4088523 4098696 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr6g0497 131 210 E2F-DP Transcription Factor Family AT5G02470 46.250 6.91e-18 84.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr6g0497 - - nau:109211934 1648.64