Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr6g0496 ATGGCATCAGAGGCATCATCATCCTTGTCATTTTCAGTTGCATCTGTTGTTGAAGATGTCCTTCAACAACACGGTCATCGCCTCAAACATCTTGATTTAGATTCCAGGATAGCACAACAAGCTGCATCTAGAAGATATGAAGCAGCAGGGTGGTTAAGAAAAATGGCTGGAGTTGTTGCAGCTAAAGATTTACCGGCAGAGCCATCGGAGGAAGAGTTTAGGCTTGGTTTGAGAAGTGGAATTATCTTATGTAATGTTATTAATAAGGTTCAATCTGGAGCTGTTCCTAAGGTTGTGGAGAGTCCTGTTGATTCTGCAATGATCCCTGATGGAGCACCATTATCAGCATATCAATATTTTGAAAATGTGAGAAATTTTCTGGTGGCTGTACAAGAAATTGGAATTCCTACCTTTGAGGCATCTGATCTGGAACAAGGAGGAAAATCATCCAGGATTGTGAACTGCATCTTGGCCCTTAAATCCTACGGTGAATGGAAACAGAATGGGGCAAATGGTGTGTGGAAATTTGGTGGAAATCTCAAACCTACTATTTCTTCAAAATCTTTTGTGAGAAAAAACTCGGAACCATTTACTAATTCCTTGTCAAGGACCTCATCGATCAACGAAAAAACTCTGTCTACTCTTAGTTCTGATTTTGAGTCTGATAAAATGTCTGGTTCCCATTCTTTGAGTATGCTTGTTCGTTCTATTCTTTCAGATAAGAACCCGGAAGAAATTCCAATGTTGGTTGAATCTGTTTTGAATAAGGTTGTAGAGGAGTTTGAACATCGAATTGCAAGCCAAGGTGAACAGACAAAAATAACTTTAAGAGATAATGTTTCTGAAAGGAATGGATCCGCGTCGAAGGTTGTTGTGGCAGATAAAAAGGTGGAGAACAAGATTCATATGGTAGCTAAGAAAGAGGTTCGCATTGATAAAAATTGTGTGGCTACTGAGGAATTGCAACGCCAACACCTGAAGCAGCAAATGCTCTTTGACCAACAGCAAAGAGACATTCAAGAGCTAAAGCTCACTCTTCACACCACAAAAGCTGGGATGCAGTTCATGCAAATGAAATTTCATGACGAGTTTTCCAATCTTGGAATGCACATTCATGGCTTAGCTCACGCGGCTTCGGGATATCATAGAGTTCTTGAAGAAAATCGCAAACTATACAATGAAGTCCAAGATCTAAAGGGAAGTATTAGGGTATACTGTCGAGTAAGACCCTTCTTTCCTGGACAACCAAACCAATTGAGCGCAGTGCAAAATATAGAAGATGGAACTCTCACAGTTAGTATTCCTTCAAGAAATGGGAAGGGACAACGATCCTTCAACTTTAACAAAGTCTTTGGACCATCTGCTACCCAAGCGGAGGTCTTCCTTGATATGCAGCCACTTATTAGATCTGTTCTTGATGGTTATAATGTTTGCATATTTGCATATGGTCAAACAGGATCAGGAAAAACTTACACAATGACTGGACCAAAAGAGATCACAGAGAAAAGCCAAGGTGTAAATTACAGGGCTCTAAGCGATTTGTTTTTTATAGCAGATCAAAGAAAGGACACTTTCCACTATGATGTTTATGTTCAAATGATTGAGATTTATAATGAGCAAGTCAGGGATCTATTGGTCACTGATGGAACAAACAAAAGATTAGAAATTCGTAGTAGCTCTCACAAAGGGCTCAGTGTGCCAGATGCAAGCCTTGTTCCTGTGTCGTCAACTATTGATGTTATTGAACTAATGAACCTTGGCCATAGGAACCGTGTTGTTGGAGCAACAGCCCTTAACGACCGCAGTAGCCGATCTCATAGTTGCTTGACTGTTCATGTTCAAGGAAGAGATTTGACATCTGGAGCTACCATCCGCGGATGCATGCATTTGGTTGACTTAGCAGGCAGTGAAAGGGTAGATAAGTCTGAGGCCACTGGAGAAAGACTAAAAGAGGCACAGCATATTAACAAATCTCTATCAGCTTTGGGCGATGTCATTGCTTCGCTTGCTCAGAAAAACTCACATGTACCTTATAGAAATAGTAAACTCACACAATTGCTCCAAGATTCACTTGGAGGACAGGCTAAGACACTGATGTTTGTTCACATAAGTCCTGAAAGTGATGCAATTGGAGAAACAATTAGTACTTTAAAATTTGCAGAAAGAGTTGCTACAGTTGAACTTGGTGCTGCTCGAGTAAACAAAGATGGTGCAAATGTTAAAGAGCTCAAAGAACAGATTGCCAGCCTTAAGGCAGCACTGGGAAGAAAAGAAGGGGAATCAGAACATTCTTTTTCCGGAAGCTCCGAAAAATATAGGATAAAGGCTAGTGAGGTATCCCCTTATCAAATAAACCAGCGGGTTGCAGACACTGGTGATCAGCTTAGATGCCGACGACCAATGGTTGAAGTTGGCAATATAGAGCTTCAGAGTAAAATCATAATGAGGCAGAAAACTCAAAGCATTGACTTTGATGAGATATCAGCAAATTCACCACCCTGGCCCCCAGTAAATAGTCTTGCACAAAATGATGGGGAGGACGACAAAGAAACAGGTTCTGGAGAGTGGGTTGATAAGGTAATGGTAAACAAGCTAGATGCAAACAAAACTGAGAACCTCTTGGAATGTTGGCAAGAAAGCAATGGAAACTTATCTGAATCCTTTTATCAGACATATCTCCAAGATTCTTCCAAAATGTACTCAGAACAGTCTTATAATAATAACATGTTCATGGGAGGTAACCAGTTTAGTAGCATTATGATGGGTTCAGATGACAACATGGATGAGATTGATGCTGCAACCAGTGATTATTCCTCAGAACCTGATTTGCTTTGGCAATTTAATCATTCTAAACTTACCAGTTTGACTAATGGAATTGGATCAAAGACTATTATGAGATCTGTCTCAAAGGCAACAAAAAGTCCAGAATTGAGAAAGAGTTCTGTTCATTCTTCTCTCGGTCCTTCACCTTCGTTCAAACAATCGAAAGTTGTCTCACATAGGACAGGAAGAAGTCCAGCTCCTATTGACATGAAACGTAAAACTGGGAGTAGAAAGTAA 3060 0.4029 MASEASSSLSFSVASVVEDVLQQHGHRLKHLDLDSRIAQQAASRRYEAAGWLRKMAGVVAAKDLPAEPSEEEFRLGLRSGIILCNVINKVQSGAVPKVVESPVDSAMIPDGAPLSAYQYFENVRNFLVAVQEIGIPTFEASDLEQGGKSSRIVNCILALKSYGEWKQNGANGVWKFGGNLKPTISSKSFVRKNSEPFTNSLSRTSSINEKTLSTLSSDFESDKMSGSHSLSMLVRSILSDKNPEEIPMLVESVLNKVVEEFEHRIASQGEQTKITLRDNVSERNGSASKVVVADKKVENKIHMVAKKEVRIDKNCVATEELQRQHLKQQMLFDQQQRDIQELKLTLHTTKAGMQFMQMKFHDEFSNLGMHIHGLAHAASGYHRVLEENRKLYNEVQDLKGSIRVYCRVRPFFPGQPNQLSAVQNIEDGTLTVSIPSRNGKGQRSFNFNKVFGPSATQAEVFLDMQPLIRSVLDGYNVCIFAYGQTGSGKTYTMTGPKEITEKSQGVNYRALSDLFFIADQRKDTFHYDVYVQMIEIYNEQVRDLLVTDGTNKRLEIRSSSHKGLSVPDASLVPVSSTIDVIELMNLGHRNRVVGATALNDRSSRSHSCLTVHVQGRDLTSGATIRGCMHLVDLAGSERVDKSEATGERLKEAQHINKSLSALGDVIASLAQKNSHVPYRNSKLTQLLQDSLGGQAKTLMFVHISPESDAIGETISTLKFAERVATVELGAARVNKDGANVKELKEQIASLKAALGRKEGESEHSFSGSSEKYRIKASEVSPYQINQRVADTGDQLRCRRPMVEVGNIELQSKIIMRQKTQSIDFDEISANSPPWPPVNSLAQNDGEDDKETGSGEWVDKVMVNKLDANKTENLLECWQESNGNLSESFYQTYLQDSSKMYSEQSYNNNMFMGGNQFSSIMMGSDDNMDEIDAATSDYSSEPDLLWQFNHSKLTSLTNGIGSKTIMRSVSKATKSPELRKSSVHSSLGPSPSFKQSKVVSHRTGRSPAPIDMKRKTGSRK* 1020
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr6g0496 1019 CDD KISc_C_terminal 399 728 - -
Tpr6g0496 1019 PANTHER KINESIN-LIKE PROTEIN KLP-3 5 1016 - -
Tpr6g0496 1019 Pfam Calponin homology (CH) domain 44 164 IPR001715 GO:0005515
Tpr6g0496 1019 Gene3D - 34 164 IPR036872 -
Tpr6g0496 1019 SMART kinesin_4 399 734 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Tpr6g0496 1019 SUPERFAMILY Calponin-homology domain, CH-domain 44 175 IPR036872 -
Tpr6g0496 1019 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 401 758 IPR027417 -
Tpr6g0496 1019 ProSiteProfiles Kinesin motor domain profile. 401 726 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Tpr6g0496 1019 MobiDBLite consensus disorder prediction 978 1001 - -
Tpr6g0496 1019 PANTHER P-LOOP NUCLEOSIDE TRIPHOSPHATE HYDROLASE SUPERFAMILY PROTEIN 5 1016 - -
Tpr6g0496 1019 SMART ch_5 44 162 IPR001715 GO:0005515
Tpr6g0496 1019 Pfam Kinesin motor domain 407 725 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Tpr6g0496 1019 PRINTS Kinesin heavy chain signature 474 495 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Tpr6g0496 1019 PRINTS Kinesin heavy chain signature 596 613 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Tpr6g0496 1019 PRINTS Kinesin heavy chain signature 627 645 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Tpr6g0496 1019 PRINTS Kinesin heavy chain signature 676 697 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Tpr6g0496 1019 Coils Coil 733 760 - -
Tpr6g0496 1019 MobiDBLite consensus disorder prediction 970 1019 - -
Tpr6g0496 1019 ProSiteProfiles Calponin homology (CH) domain profile. 42 164 IPR001715 GO:0005515
Tpr6g0496 1019 Gene3D Kinesin motor domain 396 767 IPR036961 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr6g0496 Tpr-Chr6 4082087 4088412 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr6g0496 389 762 Calmodulin-binding Proteins AT5G65930 41.053 6.72e-77 274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr6g0496 K10406 - gmx:100795476 1640.17
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr6g0496 6 4082087 4088412 Tpr1g1328 1 11943551 11950134 PCT