Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr6g0495 ATGCCTTCTTCCGATCCCCATTCCGCCGCCACTAATATCAACCCCAAGTGTCTCCTTTTCAATGCTGCCTCTGGTGCATCTGCAGGAGTTATTGCTGCTACGTTTGTGTGTCCTTTAGATGTTATCAAAACTCGATTTCAGGTTCATGGTGTGCCTCAGCTCGCTAATGGATCTGTTAAAGGCAGTGTAATATTCGCTAGTTTGCAACAAATATTTCACAAGGAGGGGTTACGTGGCATGTACCGTGGACTAGCTCCCACTGTGTTAGCTTTGCTTCCAAATTGGGCGGTTTATTTTACTATGTATGAGCAGTTCAAAAGCCTTCTTCATTCTGATGATGAAAGCCATCACCTTTCCGTTGGAGCTAATATGGTAGCTGCTGCTGGTGCTGGAGCTTCAACTACCTTGTTTACAAATCCGCTTTGGGTTGTCAAGACTAGACTTCAAACTCAGGGAATGAGACCTGGTGTGGTGCCATATAAGAGCACATTATCTGCATTGAGTAGAATTGCACATGAGGAGGGCATACGGGGGCTGTACAGTGGCCTTGTACCTGCTCTAGCTGGTATCAGTCATGTTGCCATTCAATTCCCGATGTATGAAACAATAAAATTTTATTTAGCAAATCAAGATGACGCGGCAGTAGATAAACTTGGTGCACGTGATGTTGCTATTGCTTCATCAGTATCCAAACTTTTTGCATCCACATTGACATATCCACACGAGGTTGTACGTTCCAGATTACAAGAACAAGGGCATCACTCAGAGAAACGATACTCTGGTATGATTGACTGTATTAGAAAGGTTTTTCACCAAGAAGGTGTACCTGGTTTTTACCGAGGATGTGCCACCAACCTTTTAAGGACAACACCAGCTGCCGTAATCACATTCACCAGCTTTGAAATGATACACCGATTTCTTGTTTCACATTTTCCTTCTGATCCACAGCCTCATATTTTGTGA 963 0.4361 MPSSDPHSAATNINPKCLLFNAASGASAGVIAATFVCPLDVIKTRFQVHGVPQLANGSVKGSVIFASLQQIFHKEGLRGMYRGLAPTVLALLPNWAVYFTMYEQFKSLLHSDDESHHLSVGANMVAAAGAGASTTLFTNPLWVVKTRLQTQGMRPGVVPYKSTLSALSRIAHEEGIRGLYSGLVPALAGISHVAIQFPMYETIKFYLANQDDAAVDKLGARDVAIASSVSKLFASTLTYPHEVVRSRLQEQGHHSEKRYSGMIDCIRKVFHQEGVPGFYRGCATNLLRTTPAAVITFTSFEMIHRFLVSHFPSDPQPHIL* 321
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr6g0495 320 PRINTS Mitochondrial carrier protein signature 21 34 IPR002067 GO:0055085
Tpr6g0495 320 PRINTS Mitochondrial carrier protein signature 34 48 IPR002067 GO:0055085
Tpr6g0495 320 PRINTS Mitochondrial carrier protein signature 83 103 IPR002067 GO:0055085
Tpr6g0495 320 PRINTS Mitochondrial carrier protein signature 133 151 IPR002067 GO:0055085
Tpr6g0495 320 PRINTS Mitochondrial carrier protein signature 227 249 IPR002067 GO:0055085
Tpr6g0495 320 ProSiteProfiles Solute carrier (Solcar) repeat profile. 16 108 IPR018108 -
Tpr6g0495 320 SUPERFAMILY Mitochondrial carrier 19 302 IPR023395 -
Tpr6g0495 320 PANTHER MITOCHONDRIAL NICOTINAMIDE ADENINE DINUCLEOTIDE TRANSPORTER 1-RELATED-RELATED 11 319 IPR044712 GO:0006862|GO:0055085
Tpr6g0495 320 Pfam Mitochondrial carrier protein 21 111 IPR018108 -
Tpr6g0495 320 Pfam Mitochondrial carrier protein 117 209 IPR018108 -
Tpr6g0495 320 Pfam Mitochondrial carrier protein 224 309 IPR018108 -
Tpr6g0495 320 Gene3D Mitochondrial carrier domain 2 113 IPR023395 -
Tpr6g0495 320 Gene3D Mitochondrial carrier domain 114 313 IPR023395 -
Tpr6g0495 320 ProSiteProfiles Solute carrier (Solcar) repeat profile. 218 306 IPR018108 -
Tpr6g0495 320 PANTHER NICOTINAMIDE ADENINE DINUCLEOTIDE TRANSPORTER 1, CHLOROPLASTIC 11 319 - -
Tpr6g0495 320 ProSiteProfiles Solute carrier (Solcar) repeat profile. 118 206 IPR018108 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr6g0495 Tpr-Chr6 4071030 4078026 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr6g0495 14 320 Chloroplast and Mitochondria Gene Families AT2G47490 75.896 4.52e-163 455
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr6g0495 K15115 - gmx:100500213 551.592