Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr6g0493 ATGGCAACCAGAAATCGAACTCTAGAGTTCAGAAAGCACAGAGACACCGTCAAAAGCTTACGCACTCCACTTTCTTCATCAGCTTCTGCTTCTTCTGGTGGTCCTGTCATTGAAATGGTTAACACTTCACTTCTTCGTTCCAATAAACGATCTTCTTATGCTCCTCTTAGTACCCAAGACCCAGGTCCATCATCCTCAAGTGATGCATTTACTGTGGGTTTGCCGCCATCTTGGGTGGATGATTCTGAAGAAATAGCCACAAATATACAACGTGCAAAGGTTAAAATGTCTGAGTTAACCAAAGCTCATGCAAAGGCTTTAATGCCTTCCTTTGGTGATGGTAAAGATGATCAGCATCAGATTGAGACTCTCACCCGGGAAATTACGGCTCTCCTCAGAAAGTCTGAAGTGAGACTAAAAAAACTTTCTGCTGGCAGAGGATCTTCTGAGGAATCTAATGTCAAGAAAAATGTGCAGCGTTCGCTTGCTACAGACCTTCAGAACTTGTCAATGGACCTGCGGCGGAAGCAGTCAGCATATTTGAAACGTTTGCAGCAGCAACAAGAGGGTTATGACGGGATTGACTTGGAGATGAACTTTAATGGGAGTAAATCTGGATTGCAGGACGATGGATTTGATGATGTGGGTTTTAGTGAAGCGCAGTTGACAAAGCTAAAGAAAAATGAGCAGATTTCAGCAGAAAGAGAAAGAGAAATTGATCAGGTCGCTAAATCAGTCCAGGACCTTGCTCAAATCATGAAGGATCTCTCCGTCCTTGTGATAGACCAGGGAACAATTGTGGATAGAATTGACTACAACATTCAGAGTGTTGCTACAACTGTTGAGGAGGGCTTTAAGCAGTTGCAAAAGGCAGAAAGAACTCAGAAAAAAGGAGGGATGATTACATGTGCAACAGTGCTCGTTATCATGTGCTTTGTCATGCTAATTCTGTTGATAATCAAGGAGATAATCCTCTAG 978 0.4284 MATRNRTLEFRKHRDTVKSLRTPLSSSASASSGGPVIEMVNTSLLRSNKRSSYAPLSTQDPGPSSSSDAFTVGLPPSWVDDSEEIATNIQRAKVKMSELTKAHAKALMPSFGDGKDDQHQIETLTREITALLRKSEVRLKKLSAGRGSSEESNVKKNVQRSLATDLQNLSMDLRRKQSAYLKRLQQQQEGYDGIDLEMNFNGSKSGLQDDGFDDVGFSEAQLTKLKKNEQISAEREREIDQVAKSVQDLAQIMKDLSVLVIDQGTIVDRIDYNIQSVATTVEEGFKQLQKAERTQKKGGMITCATVLVIMCFVMLILLIIKEIIL* 326
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr6g0493 325 SUPERFAMILY t-snare proteins 74 284 IPR010989 GO:0016020|GO:0016192
Tpr6g0493 325 SMART tSNARE_6 224 291 IPR000727 -
Tpr6g0493 325 MobiDBLite consensus disorder prediction 1 37 - -
Tpr6g0493 325 SMART SynN_4 69 185 IPR006011 GO:0016020
Tpr6g0493 325 Pfam SNARE domain 265 317 IPR000727 -
Tpr6g0493 325 Gene3D - 75 283 - -
Tpr6g0493 325 ProSiteProfiles t-SNARE coiled-coil homology domain profile. 229 291 IPR000727 -
Tpr6g0493 325 MobiDBLite consensus disorder prediction 1 19 - -
Tpr6g0493 325 PANTHER SYNTAXIN OF PLANTS PROTEIN 1 320 - -
Tpr6g0493 325 MobiDBLite consensus disorder prediction 20 37 - -
Tpr6g0493 325 PANTHER SYNTAXIN 1 320 IPR045242 -
Tpr6g0493 325 CDD SNARE_syntaxin16 233 290 - -
Tpr6g0493 325 ProSitePatterns Syntaxin / epimorphin family signature. 235 274 IPR006012 GO:0005484|GO:0006886|GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr6g0493 Tpr-Chr6 4059124 4064561 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr6g0493 1 325 SNARE and Associated Proteins AT4G02195 67.485 1.63e-158 444
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr6g0493 K08489 - gmx:100803629 493.426