Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr6g0467 ATGGCTTCGATTCAACGACCGGCGAGTTCTGGATCCGACGGCGGAGATCTACAATCCGGAACAATCGACGAGAGGAAAAGGAAGAGGATGCTTTCGAACCGTGAATCAGCGAGACGATCGCGGATGAAGAAGCAAAAGCAGTTGGAGGATCTGAGCGATGAAGCGAACAGATTGCAAATCGAGAACAAGAGATTGTTGGAGAACATTAAGGCGAAGGAAGAAGCATGCATTGAAAATATAGCTGCTAATGGCGTTCTCAGAGCTCAGACTATGGAATTAACGGATCGATTACGGTTTCTTAACTCAATCCTTGAGATTGCTGAAGAAGTTAGTGGATTTTCTGTTGAGATTCCTGAAATTCCGGATACTTTGCTTGAACCGTGGAAGATTCCTCGTCCAATTCAACAACCGATTATGGCTTCTGCAGATATGTTCTTGCATTGA 444 0.4482 MASIQRPASSGSDGGDLQSGTIDERKRKRMLSNRESARRSRMKKQKQLEDLSDEANRLQIENKRLLENIKAKEEACIENIAANGVLRAQTMELTDRLRFLNSILEIAEEVSGFSVEIPEIPDTLLEPWKIPRPIQQPIMASADMFLH* 148
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr6g0467 147 PANTHER BZIP TRANSCRIPTION FACTOR 44 1 145 - -
Tpr6g0467 147 MobiDBLite consensus disorder prediction 1 52 - -
Tpr6g0467 147 Coils Coil 34 75 - -
Tpr6g0467 147 SMART brlzneu 21 85 IPR004827 GO:0003700|GO:0006355
Tpr6g0467 147 MobiDBLite consensus disorder prediction 19 52 - -
Tpr6g0467 147 CDD bZIP_plant_GBF1 26 76 IPR045314 GO:0003700|GO:0006355
Tpr6g0467 147 Pfam bZIP transcription factor 25 76 IPR004827 GO:0003700|GO:0006355
Tpr6g0467 147 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 28 43 IPR004827 GO:0003700|GO:0006355
Tpr6g0467 147 Gene3D - 23 81 - -
Tpr6g0467 147 SUPERFAMILY Leucine zipper domain 25 75 IPR046347 GO:0003700|GO:0006355
Tpr6g0467 147 MobiDBLite consensus disorder prediction 1 17 - -
Tpr6g0467 147 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 23 70 IPR004827 GO:0003700|GO:0006355
Tpr6g0467 147 PANTHER BZIP TRANSCRIPTION FACTOR 53 1 145 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr6g0467 Tpr-Chr6 3802389 3803561 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr6g0467 1 145 bZIP Transcription Factor Family AT3G62420 53.793 6.74e-47 147
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Tpr6g0467 bZIP_1 7.3e-09 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr6g0467 K25786 - gmx:780550 201.83
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr6g0467 6 3802389 3803561 Tpr1g2253 1 25328944 25330389 PCT