Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr6g0462 ATGCAAGAAGATTGGATGCCAAAACAGGGAATGCTTTTTGATAATATTGATGATGCTTGGAAGTTTTGGGTTGATTATGGGGGAAGAATGGGGTTTGGAGTGAGAAAACAATATAAACACATAAGCAAGGACGGCTCAGGCTTAGCTACTTCTTGTAGGTTCGTGTGTTGCAAAGAAGGCTTACGAAAACCGGACAAACGAGATTTTAAAACAATTAAGCCAAGACCAGAGACGAGAACTAACTGTCCAGCAAGGATAGGTCTTAAGAATATGGGTGAAAATTGGATGGTTCATGATTTTGTGGTAGAACATAACCATATGTTACACACACAAGAAACAACTCATATGTTGTCATCTCAACGAAAAGTTTCAGAAATTCACTGCCAACAAATTGATCTAGCGGATGACGCCGGTCTTCAACAAAGGAGTTCATTTGATTTGATGAGTAAAGAAGTGGGTGGCAGAACCAACTTGGGATTTACACGCCTTGATCAAAAGAATTATCTAAAAAAAAGAAGGCAAAACAGTTTAGTAAATGGGGAAGCCGGGTATCTATTGCAATACTTTCAAAAAATGTCGCTTGATAGTCCTTCTTTTTATCATGCTTATCAAATGGATGTGGAAGATCAAATTACTAATGTATTTTGGGCAGATGCGAGAATGCTCTTTGATTATGGATATTTTGGTGATGTGGTTTCTCTTGATTCAACATATTGCACAAATAGTTCATATAGACCACTAGCAGTGTTCTCGGGATTTAACCACCATCGAAAAGCGGTGATCTTTGGGGCTGCATTATTGTACGACGAAACTGCAGAGTCGTACAAGTGGCTTTTTGAGACGTTTCTAGAGGCACATAAGCAAAAAACCCCTCAAACAGTTTTTACTGATCAAGATCAAGCAATGGCAAAAGCACTTGTTTAA 924 0.3853 MQEDWMPKQGMLFDNIDDAWKFWVDYGGRMGFGVRKQYKHISKDGSGLATSCRFVCCKEGLRKPDKRDFKTIKPRPETRTNCPARIGLKNMGENWMVHDFVVEHNHMLHTQETTHMLSSQRKVSEIHCQQIDLADDAGLQQRSSFDLMSKEVGGRTNLGFTRLDQKNYLKKRRQNSLVNGEAGYLLQYFQKMSLDSPSFYHAYQMDVEDQITNVFWADARMLFDYGYFGDVVSLDSTYCTNSSYRPLAVFSGFNHHRKAVIFGAALLYDETAESYKWLFETFLEAHKQKTPQTVFTDQDQAMAKALV* 308
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr6g0462 307 Pfam FAR1 DNA-binding domain 21 109 IPR004330 -
Tpr6g0462 307 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 2 306 IPR031052 GO:0006355
Tpr6g0462 307 PANTHER OS03G0181600 PROTEIN 2 306 - -
Tpr6g0462 307 Pfam MULE transposase domain 231 306 IPR018289 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr6g0462 Tpr-Chr6 3773159 3774095 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Tpr6g0462 FAR1 4.8e-19 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr6g0462 - - vun:114182587 407.142