Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr6g0460 ATGGTCTCAAATTCTCCAGGCCCTTCCTTTGGATCTCAAGTGAAACATGAAGGGGGGTCATCTAACACTCGTCAAACTTTGTGGAACAAGATAAATTTGTTGAAAAAGCAAATCCAAAAGGAACGAGTTGAATCGATTAAAGAAAAGATTCAGAGAAATGGGAAGAATCTCCAATGTCAACTTTCTGAGGTCATGTTAGTTATATCATCAAGAAATACATCATTACAAAGTGAGGAAAGTACTCTTAATATATTTTCTTCAAGAATGGATCATCCTCAGCGTAAGTTCAACAGTTGCATCCCTCGAGTTTCGACAGAGGGTGACCAAATCAACAATCCAGATGCACCATTAGTGAAAAGTATAAAGATGACACTCATTGAAAGATTGCCTCGATTTACATTTTGGACAAATTTAACCAGAAATGAATTAATGACTGAAGATCAATCTGTTTTTAGAACAAGATATATAAATTATGATCATCATGGAGGTGAAACATTAATAACCAATATCAGTGATACTGAGGAAGAGCCAAAAGAGTACAAGGAAGTTCAACGTGACTTTTCGGAAGGTGAAGACCAATTTCTAAGGATGGTATTTGAAAAACATGGTTTAACTGAGGAGGTTTTGAGCATTGTTAGCGATGTTATCGGGGGTACCAGTTCAGAAATTCAGGAGAGGTATGAACATATCAAGGAAAAGGAACAAAATTCTGAAGATTATGAAGAAAGTGGATCTCACACTGAGAAACGTTTGCAAAAAAGTTTGAGCGTAACTTTAGATGGTTTTAACCACCTTTTATGTCGCCAGTGCATGATCTTCGATTGTTCTGTGCACGGACGCTCTCAAAAGTTTATATATCCAAATGAAAAGCAAAATGTTTGGTCAGAACCAGAAGATGACAGAAAACCATGTAGTGATTATTGTCACCTTAATGATAAAGATGCTACAATTAGTGATTCTATGAGGGACCTAAATTTGGATACTGCTTGCAATGAAGAACAACATGTCATGGATGAAACAGAATTGAATCAAGGATCTAACTCAATGGAAGGACAAATTGAGGAAGATTCTAGTGTTTCAAATTGGAAACCTTTGGAGAAAGAATTATATCTGAAGGGAATAGAAATGTTTGGGAGAAACAGTTGCCTTATATCTCGGAACTTACTCGCTGGATTGAAGACTTGCAAGGAAGTTTCTAAATACATGTCTGCTGAAGCGTCAAGGCCACATGGATACATGGGCGAAAATGGAAGATTTGATGCAATGTCCACTGACAATAAGACGCCATCAAGGCCGCGGAAAGTGCCAAGAAAAAACAAAGCGAAGAGGTTCTCTTCAAAATCTGCAGGACTTCCATCTACATGGAAACAAGTTACTGAATGTAAAGGAAAACATTCATGTGAAAAATATAAGCAGTATACACCTTGTGAATGTAAAGGAACGTGTGGAAAAGAATGTTCATGTCTTGTTGGTGGATATTTCTGCGAAAAATATTGCGGGTGTTCGATGCTTTGTAGAAATCGATTTGGAGGATGTCATTGTAATAAGACTCATTGTAGAAGTAGGCATTGTCCATGCTTTGCAGCATTAAGAGAATGTGACCCAGATGTATGTAAAAATTGTTGGGTTAGTTGTGGTGATGGTTCATTAGGAGAGTCATCTCATCGTGCAGAGGGTCAATGTGAAAATATGAATATGCTTTTAGGGAAAAAAAAACATAAGATTCTTTGGGGAAGGTCTGATATTACTGGATGGGGAGCATTCTTAAAGAACCATGCAAACAAAAATGATTTTCTAGGAGAATACACAGGTGAACTAGTCTCTCACATAGAAGCTGAGAAACGTGGAAATTTTTATGATTGTACAAGCTTTTCTTCTTTTCTTTTCAACTTGAATAATACGAACTGTATCATTCGATCTTGA 1923 0.3687 MVSNSPGPSFGSQVKHEGGSSNTRQTLWNKINLLKKQIQKERVESIKEKIQRNGKNLQCQLSEVMLVISSRNTSLQSEESTLNIFSSRMDHPQRKFNSCIPRVSTEGDQINNPDAPLVKSIKMTLIERLPRFTFWTNLTRNELMTEDQSVFRTRYINYDHHGGETLITNISDTEEEPKEYKEVQRDFSEGEDQFLRMVFEKHGLTEEVLSIVSDVIGGTSSEIQERYEHIKEKEQNSEDYEESGSHTEKRLQKSLSVTLDGFNHLLCRQCMIFDCSVHGRSQKFIYPNEKQNVWSEPEDDRKPCSDYCHLNDKDATISDSMRDLNLDTACNEEQHVMDETELNQGSNSMEGQIEEDSSVSNWKPLEKELYLKGIEMFGRNSCLISRNLLAGLKTCKEVSKYMSAEASRPHGYMGENGRFDAMSTDNKTPSRPRKVPRKNKAKRFSSKSAGLPSTWKQVTECKGKHSCEKYKQYTPCECKGTCGKECSCLVGGYFCEKYCGCSMLCRNRFGGCHCNKTHCRSRHCPCFAALRECDPDVCKNCWVSCGDGSLGESSHRAEGQCENMNMLLGKKKHKILWGRSDITGWGAFLKNHANKNDFLGEYTGELVSHIEAEKRGNFYDCTSFSSFLFNLNNTNCIIRS* 641
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr6g0460 640 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE 20 323 - -
Tpr6g0460 640 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE 336 633 - -
Tpr6g0460 640 Gene3D SET domain 473 639 IPR046341 -
Tpr6g0460 640 Pfam CXC domain 511 542 IPR041355 -
Tpr6g0460 640 SUPERFAMILY SET domain 469 632 IPR046341 -
Tpr6g0460 640 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE E(Z) 20 323 IPR045318 GO:0006338|GO:0018024
Tpr6g0460 640 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE E(Z) 336 633 IPR045318 GO:0006338|GO:0018024
Tpr6g0460 640 ProSiteProfiles CXC domain profile. 455 558 IPR026489 -
Tpr6g0460 640 SMART sant 358 408 IPR001005 -
Tpr6g0460 640 SMART sant 183 233 IPR001005 -
Tpr6g0460 640 MobiDBLite consensus disorder prediction 1 23 - -
Tpr6g0460 640 MobiDBLite consensus disorder prediction 424 443 - -
Tpr6g0460 640 SMART CXC_2 512 544 IPR033467 -
Tpr6g0460 640 SMART CXC_2 471 511 IPR033467 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr6g0460 Tpr-Chr6 3761292 3766056 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr6g0460 - K11430 mtr:MTR_7g109560 756.133
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr6g0460 6 3761292 3766056 Tpr1g2257 1 25351241 25360870 PCT