Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr6g0459 ATGGAAATCAACCATTTTTCTTCCACTCATCACTCTCTAGAACAACTTATGTTCCAAGAGATTCATGAGAATGAAAAAGTGTCAAACATGTTCAACAATCAAAACCATCATCAGAAACAACAACAACAACCAGAACAAGAATTCGACGTTATTGGTAACTTCATGTCACTAGAAGATAATATCAACTTCAACCCTTGTCAACAAAAGAATAATCAAAACAAAGTTTCAATTCCAAAACCTTTACAAAACAATATGCAGAAGATGCCATTGTCTTTATCATCTTTAGAGATTCTCAGAAATCATGGAAGCAGATTCAACAAGAAAAACATAATCAATACTAAAACTTGTTCAAATTTGGAACAACATCAAATGATGTCAACAGAAGAAATAATAAGAGTAGCTGGAACAAGGTATACTCAATACTCTTCTTCTCATTGGAGTGAAAATATTTACATCCAAACACATCCTTATGGATTTGATTTTCATGGTTTAACTGAAGAACAAAATAGAGACATTGAACTTGCACAGTTTCTATTTTCAGCAGCTGAAAGGGTAAGTTTTCAACAATTTGAACGTGCAAAAAAGTTACTTTTTTATTGTCAATGGAATTCATCTATCACAGGTAACTCTGTTCAAAGAATTGTTTTTTATTTTTCACAAGCACTTTTAGAGAGGATAGAGAAAGAAACAGGAAGAGTGATTAAAGGGTCAGAGAAAAATGAAGAAGTTGAGTTAATTCAGAATATGGATCCAAAAAAAGCACTTTCCTGTCATCAAAAAATTCCTTTTAATCAAGTTATGCAATTTACTGGTATACAAGCTATAGTTGAACATGTTATGTTTGAGACTAAAATTCATCTAATAGATCTTAATATAAAAAGTGGGGTTCAGTGTATAACTTTGATGCAAGCTTTGGCTGATAGAAAAGATTGCATGGTTGAGATTTTTAAGGTAACTGCTATTGGAGTCAATTCATGCAAGGACAAGATTGAAGAAACTGGTAAAAATTTAGCTAGTTTCGCGGTATCGTTGAACTTACCCTTTTTATTTAAGGCTATTTTAGTAGAAGACATGTTGGAAATTAAAGAAGATGATTTCCAAATCGAAGAGGATGAAGCTGTTGCGGTATACTCGCCATATTTTCTTAGGACTTTGATATCAAGGCAAGAGAGTTTGGAAAATTTGATGAGGGTTATAATGTATATCAAACCATCTATAATGATTGTTCTTGAAATTGAAGCAAGTCTTAATTCGCCGTCATTTGTGAACCGGTTTGTGGAAGCGTTGTTTCACTACTCGGCTTTTTTCGATATCCTTGAAACATGTATTAAAGAGGAGGATGAGTGTAGAATGATGACAGAAGGAATATTATCTGCAGGGATAAGAAATATTGTTGCAACAGAAGGTAGTGAAAGGAATGTTAGAAATGTGAAAATTGATGTTTGGAGAAAGTTTTTTGCAAGGTATAGAATGGTTGAAACTAGGTTTAGTGAGGCATGTAATTACCAAGCTGAATTGGTGGTTAAGAAGTTTGATTATGGGAATTTTTGCAATGTGGAAAAGAATGGGAAGTGTTTGATATTAGGATGGAAAGGGACTCCAATGCATTCAATCTCAGCTTGGAGGTTTCTTTGA 1635 0.3321 MEINHFSSTHHSLEQLMFQEIHENEKVSNMFNNQNHHQKQQQQPEQEFDVIGNFMSLEDNINFNPCQQKNNQNKVSIPKPLQNNMQKMPLSLSSLEILRNHGSRFNKKNIINTKTCSNLEQHQMMSTEEIIRVAGTRYTQYSSSHWSENIYIQTHPYGFDFHGLTEEQNRDIELAQFLFSAAERVSFQQFERAKKLLFYCQWNSSITGNSVQRIVFYFSQALLERIEKETGRVIKGSEKNEEVELIQNMDPKKALSCHQKIPFNQVMQFTGIQAIVEHVMFETKIHLIDLNIKSGVQCITLMQALADRKDCMVEIFKVTAIGVNSCKDKIEETGKNLASFAVSLNLPFLFKAILVEDMLEIKEDDFQIEEDEAVAVYSPYFLRTLISRQESLENLMRVIMYIKPSIMIVLEIEASLNSPSFVNRFVEALFHYSAFFDILETCIKEEDECRMMTEGILSAGIRNIVATEGSERNVRNVKIDVWRKFFARYRMVETRFSEACNYQAELVVKKFDYGNFCNVEKNGKCLILGWKGTPMHSISAWRFL* 545
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr6g0459 544 Pfam GRAS domain family 175 542 IPR005202 -
Tpr6g0459 544 ProSiteProfiles GRAS family profile. 165 542 IPR005202 -
Tpr6g0459 544 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 23 542 IPR005202 -
Tpr6g0459 544 PANTHER GRAS FAMILY TRANSCRIPTION FACTOR 23 542 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr6g0459 Tpr-Chr6 3752892 3754863 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr6g0459 164 543 GRAS Transcription Factor Family AT3G03450 29.974 2.35e-49 177
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Tpr6g0459 GRAS 1.4e-79 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr6g0459 - - gmx:100791952 615.92