Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr6g0457 ATGGACAATAATGCATCCCCCCAACTTGAGTCAGAAGCATCTAATTCTGAGCTCAAACAAGAATCTCAACCATTCAAGAAGCGTAAAATGGTTGAGAAAACAGTTGTAACTGTGAAAATAGGAGAGAATGTTAGCAAGCTGAAGAATGAAGGACTTCCTTCAGATTTTTGGTCATGGAGGAAATATGGACAAAAGCCAATCAAAGGGTCTCCATATCCAAGGGGATATTATAGGTGCAGCACATCAAAGGGATGTTCAGCCAAAAAGCAAGTAGAGAGAAGTAGCACAGATGCTTCAATGCTTATCATCACCTATACTTCAAAACATAACCATCCAGATCCTACTGTCGACTCCACCACAAACTCAGCTCAACAACCAAAAGAATCCGAAACCGAAACAATCAAAGATATCCCAGTTACCTCCAATGAAGAAGACCAAGAACATATCGTCGAGGAAATGATTAATAATAAGAGCATTGTAACTAGTACTGATCAAGTTACGAACGAAGAAAATTTTCATTACTTGCAATCTCCAATACACTGCTCTGAGGAGATTATTGTAGACCAAGAAGATCCTTTCAAATCGAACATAGAAAAAAGCCATATTGACAAAATAGATATTCTCTTAGAGGAAGAGCCACTTTGCTATGCACAGTTAAAGAATTTGACAGAATCTAAATCAGAAGAACTTGATTTTTTCGATGAGCTTGAGGAGTTACCTATGTCTTCATCTATTTTACATTTTACTAGGAGCATTTTTTCTAATGAAAGGATTCCTGTTGCTCCTTCTTGA 792 0.3737 MDNNASPQLESEASNSELKQESQPFKKRKMVEKTVVTVKIGENVSKLKNEGLPSDFWSWRKYGQKPIKGSPYPRGYYRCSTSKGCSAKKQVERSSTDASMLIITYTSKHNHPDPTVDSTTNSAQQPKESETETIKDIPVTSNEEDQEHIVEEMINNKSIVTSTDQVTNEENFHYLQSPIHCSEEIIVDQEDPFKSNIEKSHIDKIDILLEEEPLCYAQLKNLTESKSEELDFFDELEELPMSSSILHFTRSIFSNERIPVAPS* 264
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr6g0457 263 SUPERFAMILY WRKY DNA-binding domain 50 114 IPR036576 GO:0003700|GO:0006355|GO:0043565
Tpr6g0457 263 MobiDBLite consensus disorder prediction 1 20 - -
Tpr6g0457 263 Pfam WRKY DNA -binding domain 55 112 IPR003657 GO:0003700|GO:0006355|GO:0043565
Tpr6g0457 263 PANTHER WRKY TRANSCRIPTION FACTOR 21-RELATED 15 248 IPR044810 GO:0003700
Tpr6g0457 263 Gene3D WRKY domain 38 115 IPR036576 GO:0003700|GO:0006355|GO:0043565
Tpr6g0457 263 ProSiteProfiles WRKY domain profile. 48 114 IPR003657 GO:0003700|GO:0006355|GO:0043565
Tpr6g0457 263 MobiDBLite consensus disorder prediction 108 133 - -
Tpr6g0457 263 MobiDBLite consensus disorder prediction 108 128 - -
Tpr6g0457 263 MobiDBLite consensus disorder prediction 1 29 - -
Tpr6g0457 263 PANTHER WRKY TRANSCRIPTION FACTOR 69-RELATED 15 248 - -
Tpr6g0457 263 SMART WRKY_cls 53 113 IPR003657 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr6g0457 Tpr-Chr6 3743726 3745998 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr6g0457 1 115 WRKY Transcription Factor Family AT2G34830 56.667 1.37e-37 135
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Tpr6g0457 WRKY 5.6e-25 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr6g0457 - - gmx:100127368 382.489