Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr6g0454 ATGTCAATCGATATATTGAAAAAGGTTCAATGCTTATTGCTGAAATGGATGCTTATATTATCTTACCTAGTATTTATGATTGAGTCTGGTATACATGAAAAAACTGTAGAAATTCCCACCGGGTTGAGTTATGTGCTTTCTGGTGGTGCTCCAATTGTAACACTATCACCAGACAATCCTCCTTCATATAGTCCTTTCATAAATCCTAGCCAACCCCCAAAAAGTTCACATTTTTCAATCCCATTCAAGAAGAGGGGTGAATGGAAACTTCCAATTTCTGGCTTTAAAAATATTGCTCCTATTCATTCAACGGAAGCTGCAGTCCCTTCTGCGTTGACACAGCCACCGTTGACCCATCATGCTTCTAATTGTTGTAAACAAGACATGGTGTTGAAACGAGGCAGTAAGGGTTGCCACTGTGTATATCCCATAAAGCTAGACATTCGTCTTTTGAATGTCTCTCAGAATCCTGATTGGGATAAATTTCTTGAAGAATTTGCTACTCAGCTAGGGTTGCAAAATAATACCCAGATTGACCTGATAAACTTTTATGTAGTCAACCAATCAACATATAATATCTCAATGGATATTACTCCACATAAAGGCATCAGTTTCTCTGCCAGCGAAGCTTCTAAAATAAACTCTTCACTTTTAATGAACAAGGTTCGATTAGACCCTGGACTAGTAGGTGGGTACAAACTTCTCAACTTGATCTGGTTTGAACCTCCACCTCCGACTCAAGCTCCTACTTTAACTGCATCGCCGGAGAAAGCACCTTTGTATCATTCACCTACAGCTACATCACCGAGTTCTTCAAACAAGGGAGGGCATTCAAATCTATTTCTTATTCTTGGAATTGCTATTGGCATGCTCTTCATTGCAATTGTATCTATATTAATTTTCTGTTTATGCACCTTGCTGAAGAAGGAAAAAACACCCCCCATAGAAACTGAAAAGCCAAGGACAGAAAGTGCTGTTTCAGCTGGGGGTTCTATTCCCCACCCAACCAGTACACGATTTATTGCTTATGAAGAACTTAAAGAAGCAACAAACAACTTTGAACCTGCAAGTGTACTTGGAGAAGGAGGGTTTGGCAAAGTTTTTAAAGGTATCTTAAGTGATGGTACTTCTGTTGCAATTAAGAGGCTTACAAGTGGAGGGCAACAGGGTGACAAAGAGTTTTTGGCCGAGGTGGAAATGCTTAGCCGGTTGCATCATCGTAACCTTGTAAAACTAGTGGGATACTATAGTAATCGCGAGTCATCACAAAATCTACTTTGCTATGAGCTTGTCCCTAACGGAAGTTTGGAGGCTTGGCTTCATGGTCCCGTGGGAATAAATTGTCCACTGGATTGGGACACTAGAATGAAGATTGCTCTTGATGCTGCAAGAGGACTTTCGTACTTGCATGAAGACTCACAACCGTGTGTAATACACAGAGATTTTAAGGCATCCAACATATTACTCGAGAACAATTTTCATGCTAAGGTTGCAGATTTTGGTCTTGCTAAGCAGGCACCTGAAGGTGGAGCTAATTATTTGTCTACTCGTGTCATGGGCACATTCGGGTATGTTGCTCCTGAGTATGCCATGACTGGACACCTACTTGTTAAAAGTGATGTTTATAGCTATGGAGTTGTCTTGCTAGAACTGCTCACTGGAAGGAAACCTGTGGATATGTCGCAGCCAAATGGACAAGAGAACCTTGTTACTTGGGCTAGGCCAATCCTTAGAGATAAGGACCGGTTAGACGAGATTGCTGATCCGAAGCTTGGGGGAAAGTATCCAAAGGAAGATTTTGTGCGTGTGTGCACTATTGCAGCAGCATGTGTTGCTCCTGAAGCAAACCAAAGACCCACAATGGGTGAAGTGGTACAGTCACTTAAAATGGTGCAGCGCATCACAGAATACCATGAGTCTGTGATAGCCTCATCTAATACACAGACCAATCTGAGACAGTCCTCTAGCACTTTTGAGTTTGATGGAACATCTTCAGTATTCTCCTCAGGCCCTTACTCTGGTCTAAGTGCTGCCTTTGACAATGACAACATTTCTAGAACAGTGGTTTTCTCGGAAGATCTTCATGAAGGACGATGA 2097 0.4173 MSIDILKKVQCLLLKWMLILSYLVFMIESGIHEKTVEIPTGLSYVLSGGAPIVTLSPDNPPSYSPFINPSQPPKSSHFSIPFKKRGEWKLPISGFKNIAPIHSTEAAVPSALTQPPLTHHASNCCKQDMVLKRGSKGCHCVYPIKLDIRLLNVSQNPDWDKFLEEFATQLGLQNNTQIDLINFYVVNQSTYNISMDITPHKGISFSASEASKINSSLLMNKVRLDPGLVGGYKLLNLIWFEPPPPTQAPTLTASPEKAPLYHSPTATSPSSSNKGGHSNLFLILGIAIGMLFIAIVSILIFCLCTLLKKEKTPPIETEKPRTESAVSAGGSIPHPTSTRFIAYEELKEATNNFEPASVLGEGGFGKVFKGILSDGTSVAIKRLTSGGQQGDKEFLAEVEMLSRLHHRNLVKLVGYYSNRESSQNLLCYELVPNGSLEAWLHGPVGINCPLDWDTRMKIALDAARGLSYLHEDSQPCVIHRDFKASNILLENNFHAKVADFGLAKQAPEGGANYLSTRVMGTFGYVAPEYAMTGHLLVKSDVYSYGVVLLELLTGRKPVDMSQPNGQENLVTWARPILRDKDRLDEIADPKLGGKYPKEDFVRVCTIAAACVAPEANQRPTMGEVVQSLKMVQRITEYHESVIASSNTQTNLRQSSSTFEFDGTSSVFSSGPYSGLSAAFDNDNISRTVVFSEDLHEGR* 699
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr6g0454 698 ProSitePatterns Serine/Threonine protein kinases active-site signature. 477 489 IPR008271 GO:0004672|GO:0006468
Tpr6g0454 698 PANTHER OS01G0750732 PROTEIN 47 698 - -
Tpr6g0454 698 ProSiteProfiles Protein kinase domain profile. 353 641 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr6g0454 698 Gene3D Phosphorylase Kinase; domain 1 319 430 - -
Tpr6g0454 698 ProSitePatterns Protein kinases ATP-binding region signature. 359 381 IPR017441 GO:0005524
Tpr6g0454 698 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE ALE2 47 698 - -
Tpr6g0454 698 SUPERFAMILY Protein kinase-like (PK-like) 330 630 IPR011009 -
Tpr6g0454 698 Pfam Protein tyrosine and serine/threonine kinase 357 628 IPR001245 GO:0004672|GO:0006468
Tpr6g0454 698 CDD STKc_IRAK 359 629 - -
Tpr6g0454 698 Gene3D Transferase(Phosphotransferase) domain 1 431 654 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr6g0454 Tpr-Chr6 3727125 3733411 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr6g0454 50 698 Receptor kinase-like Gene Family AT4G02010 71.166 0.0 941
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_Extensin Tpr6g0454 Pkinase 4.4e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr6g0454 - - mtr:MTR_7g109670 1274.61