Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr6g0449 ATGGAGGAGGATTATGAGATTGGATCTTATTTTCCTAGCTATTCTTTATCTAGTGTGTTTGATTTATCTGAAGATAAGAGTTCTTCTGTTGGTGGGTTTATGGAGTTATTGGGTGTGCAGAATATGAGTAGTATGTTTGATTATCCTGTGGATGATGCAGTAGTAAAGGAAACATCTTTGGAGAAGAAAGAGTGTTCAGAGGTTTTTAATAGTAATAGTATTAGTCAACAACCAGCTACTCCTAACTCTTCTTCCATTTCATCTGCTTCTAGTGAAGCAATCAATGATGAACAAACTAAAACTGTTGACCAAGCTAATAATCAACTCAACAAACAGTTGAAGGCTAAGAAAACAACAAATCAGAAGAGACAGAGAGAAGCAAGAATCGCTTTCATGACTAAAAGCGAGGTGGATCATCTGGAAGATGGGTACAGATGGAGAAAGTACGGACAAAAAGCTGTTAAAAATAGCCCCTTTCCCAGGAGCTATTATCGTTGCACCAGTGTTTCATGTAATGTGAAGAAACATGTGGAGAGGTCTTTGAATGATCCAACCATTGTAGTGACAACCTATGAAGGAAAACACACTCATCCAAATCCAGTTATGGCTCGTTCTTCATCTGTTCATGCTGGATCTCTATTACCATCACCTGAATGCACCACTAACTTTGTCTCTTATCAAAACTATAATATGTCTCAATATTATAATCAGCAGCGTCAACAAGCCGTTTTTAGTAATTTGTCATCTTTGGGTTTCACTTCAAAGAATGCTGCTCAAGAGAGATCACTTTGTAATAATCCAAGGTTAATGGACAATGGCCTTCTTCAAGATGTTGTTCCTTCACATATGTTCAAGGAGGAGGAGTAG 867 0.3772 MEEDYEIGSYFPSYSLSSVFDLSEDKSSSVGGFMELLGVQNMSSMFDYPVDDAVVKETSLEKKECSEVFNSNSISQQPATPNSSSISSASSEAINDEQTKTVDQANNQLNKQLKAKKTTNQKRQREARIAFMTKSEVDHLEDGYRWRKYGQKAVKNSPFPRSYYRCTSVSCNVKKHVERSLNDPTIVVTTYEGKHTHPNPVMARSSSVHAGSLLPSPECTTNFVSYQNYNMSQYYNQQRQQAVFSNLSSLGFTSKNAAQERSLCNNPRLMDNGLLQDVVPSHMFKEEE* 289
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr6g0449 288 Coils Coil 95 126 - -
Tpr6g0449 288 MobiDBLite consensus disorder prediction 67 96 - -
Tpr6g0449 288 SMART WRKY_cls 140 199 IPR003657 GO:0003700|GO:0006355|GO:0043565
Tpr6g0449 288 SUPERFAMILY WRKY DNA-binding domain 132 200 IPR036576 GO:0003700|GO:0006355|GO:0043565
Tpr6g0449 288 ProSiteProfiles WRKY domain profile. 135 200 IPR003657 GO:0003700|GO:0006355|GO:0043565
Tpr6g0449 288 PANTHER WRKY TRANSCRIPTION FACTOR 10 271 - -
Tpr6g0449 288 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 10 271 IPR044810 GO:0003700
Tpr6g0449 288 PIRSF WRKY_txn_fact_IIc 2 288 IPR017396 GO:0003700
Tpr6g0449 288 Pfam WRKY DNA -binding domain 141 198 IPR003657 GO:0003700|GO:0006355|GO:0043565
Tpr6g0449 288 Gene3D WRKY domain 124 201 IPR036576 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr6g0449 Tpr-Chr6 3674474 3676463 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr6g0449 78 287 WRKY Transcription Factor Family AT2G47260 56.356 1.85e-62 199
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Tpr6g0449 WRKY 1.8e-26 CL0274
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr6g0449 6 3674474 3676463 Tpr1g2265 1 25436159 25438004 PCT