Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr6g0442 ATGAAACCGAACATCGATGAACCCGACATTGCACAACCTAATGTAGTTGAACCCACAAATATTTTGGTTAACACTGCCAATTATTTTTTTAAGTGTGAAAAGTATAAGGTTCGAGATGAGATGATCGAATGGTGCAAAAAAGAGGCTATAAAAGCTGGATTTACTATGGTGATTGTGAAATCAGATAACGGTTCTTACCGAAGGAAAAAGACTTTAGTATTGGGTTGCTCAAGAGGCGGTGCGTACAAAGAACCGAATAGGAAATTGAAGAAAGAAGACACGGCTACGAGGAAATTGAACTGTCCGTTCAGACTGCGAGGTTACTTTTTGGCATCAGAGGAATGGAGACTAAGTGTTGTGTGTGGTGAACATAACCACAAGTTGGCAAAAAATCTAGAAGGTCATACTCTTGCCGGACGTTTAAAACCAGAGGAGAAGGAGTGTGTGCAGGAGTTGTCAAAGAATTTGGTGGCCCCGAAGAACATATTGTCGACACTGAGAGGGAGAAATCCGGATATCAAGACTTCAATGAAGCAAATATACAATGTGCGCCAAAGGTTAAAAAAAGATGCTAGGGGTGAAATGTCTGAATTGCAACAACTCATGAAGTTGTGTGAAAACAACAAATATTTTCACAAGTGTAGAACAATTGGTGACTCGACTACTATACAAGATATTTTTTGGGCACATCCTGAAAGTGTGAAATTGCTTAACACTTTCCCTACTGTTTTAGTGTTGGATTCAACGTACAAAACCAACAAGTAA 765 0.3935 MKPNIDEPDIAQPNVVEPTNILVNTANYFFKCEKYKVRDEMIEWCKKEAIKAGFTMVIVKSDNGSYRRKKTLVLGCSRGGAYKEPNRKLKKEDTATRKLNCPFRLRGYFLASEEWRLSVVCGEHNHKLAKNLEGHTLAGRLKPEEKECVQELSKNLVAPKNILSTLRGRNPDIKTSMKQIYNVRQRLKKDARGEMSELQQLMKLCENNKYFHKCRTIGDSTTIQDIFWAHPESVKLLNTFPTVLVLDSTYKTNK* 255
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr6g0442 254 Coils Coil 184 208 - -
Tpr6g0442 254 PANTHER PROTEIN FAR1-RELATED SEQUENCE 5-LIKE ISOFORM X1 74 253 - -
Tpr6g0442 254 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 74 253 IPR031052 GO:0006355
Tpr6g0442 254 Pfam Transcription factor AFT 30 128 IPR014842 GO:0000981|GO:0036086
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr6g0442 Tpr-Chr6 3588916 3589680 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Tpr6g0442 AFT 8e-06 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr6g0442 - - mtr:MTR_4g119600 199.134