Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr6g0434 ATGGAAGAAACATTTGTACCTCTTGAGGGTATCAAGAATGATCTAAAAGGAAGGTTAATGTGCTATAAGCAAGATTGGACAAGTGGAATCAAAGCAGGTGTAAGGATTTTGGCCCCCACAACATACATATTTTTTGCTTCTGCAATACCTGTTATTTCATTTGGTGAACAACTCGAGAGAAATACCGAGGGTGTTCTAACAGCTGTTCAAACCTTAGCAGCAACTTCAATATGTGGCATTATACACTCAATCATTGGTGGTCAACCTTTATTGATTTTAGGAGTGGCAGAACCTACTGTGATCATGTACACATTCATGTTCAATTTTGCTAAAGAAAGACCTGAGTTGGGTAGGAATCTGTTTCTTGGATGGGCTGGATGGGTATGTGTCTGGACTGCATTGATACTATTCTTACTGGCAATATTAGGAGCATGTTCCATCATCAACAGATTTACCCGAATTGCAGGCGAGTTGTTTGGCATGCTTATTGCAATGCTTTTCATGCAACAGGCTATCAAAGGGCTCGTGGATGAGTTTCGCATACCAAAGAGAGAAGATACAAAATTAGTTGAATTTTTACCTTCATGGAGGTTTGCTAATGGGATGTTTGCTTTGGTCCTTTCATTTGGCCTTCTCCTCACTGCATTAAAGAGCCGAAAGGCTAGATCATGGCGTTATGGGAGTGGTTGGCTTCGCAGCCTTATAGCCGACTACGGTGTTCCTCTTATGGTCCTAGTTTGGACAGGTGTGTCCTACATGCCGACTGCAAGTGTTCCACACGGTATCCCAAGGCGTCTCTTTAGTCCAAATCCGTGGTCGCCCGGTGCCTACGACAATTGGACTGTTGTTAAGGATATGGGTAATGTTCCGGTCGTCTTCATAATTGGAGCATTTATACCAGCAACTATGATTGCTGTGCTTTATTACTTTGATCACAGTGTTGCATCTCAGCTTTCTCAGCAGAAAGAGTTCAATTTGAAAAAGCCATCATCTTACCATTATGATTTGCTCCTTTTGGGATTTTTGACATTGTTGTGTGGCCTTATTGGAATCCCTCCTGCAAATGGAGTCATACCGCAGTCTCCAATGCATACAAAGAGTCTAGCAACTCTTAAACATCAATTGCTTCGTAACAAACTCGTGAAATCTGCTCGGGAAAGTATCAGTAAGAATGCTAGTTTAGGACAGTTATATGGTAATATGCAAGAAGCATATCATCAAATGCAGACACCTCTTATTTACCAAGACCCTTCTGCTCGAGCACAAGGATTAAAAGAATTAAAAGAAACAACCATTCAAGCAGCTACAAGTATGGGAAACGTGGACGCCCCAGTCGATGAAACTATATTTGATGTCGACAAAGAAATAGATGACTTGCTTCCTGTCGAGGTAAAGGAACAACGTGTCAGTAACTTGCTTCAATCAGTAATGGTTGGAGGATGTCTTGCAGCCATGCCTATTCTCAAGAAAATCCCAACTTCAGTACTTTGGGGTTACTTTGCTTTCATGGCAATTGAAAGTTTACCTGGAAACCAGTTTTGGGAAAGGATCTTATTACTCTTCACAGCACCGAGCAGAAGATACAAGGTGCTTGAAGATTACCATGCTACGTTCGTTGAAACAGTTCCGTTTAAGACAATAGCAACATTCACAATTTTCCAAACCATTTATCTACTTATATGTTTTGGACTAACTTGGGTACCTATTGCCGGAGTCATGTTTCCTTTGATGATCATGCTCTTAGTTCCATTAAGACAGTATTTTCTCCCCAAATTTTTCAAAGGTGTGCATCTTCAAGACTTGGATGCAGCTGAATATGAGGAGCAAACTGCTTTACCATTCAACATTGCAGCTCAATCGGAGTTTGGAGCCGGTGCTTCTCATATTGGAGAAGGTGAGATATTTGACGAAGTTCTCACTAGAAGCCGTGGTGAATTTAGGCATACTACTCCCAGTCCAAAGATCAATAGCTCCACACCAACACCAAGAAATAATCCTCAAAGTCGTCTTAGCCCGCGCCCCTCCTTTAATTCTCGTGTGGGTGAGTTCTCGACCGAGCAAAGTCCTAGGTCTGGCACAAGAGGCCCCAACAGTCCAATGGCTAGAGAAATAAGATTGTCAACTAGGGGGGTAAGTCCTCTCAAACCTGATTCAAAACCGCAGGACAAAAAATAA 2175 0.4198 MEETFVPLEGIKNDLKGRLMCYKQDWTSGIKAGVRILAPTTYIFFASAIPVISFGEQLERNTEGVLTAVQTLAATSICGIIHSIIGGQPLLILGVAEPTVIMYTFMFNFAKERPELGRNLFLGWAGWVCVWTALILFLLAILGACSIINRFTRIAGELFGMLIAMLFMQQAIKGLVDEFRIPKREDTKLVEFLPSWRFANGMFALVLSFGLLLTALKSRKARSWRYGSGWLRSLIADYGVPLMVLVWTGVSYMPTASVPHGIPRRLFSPNPWSPGAYDNWTVVKDMGNVPVVFIIGAFIPATMIAVLYYFDHSVASQLSQQKEFNLKKPSSYHYDLLLLGFLTLLCGLIGIPPANGVIPQSPMHTKSLATLKHQLLRNKLVKSARESISKNASLGQLYGNMQEAYHQMQTPLIYQDPSARAQGLKELKETTIQAATSMGNVDAPVDETIFDVDKEIDDLLPVEVKEQRVSNLLQSVMVGGCLAAMPILKKIPTSVLWGYFAFMAIESLPGNQFWERILLLFTAPSRRYKVLEDYHATFVETVPFKTIATFTIFQTIYLLICFGLTWVPIAGVMFPLMIMLLVPLRQYFLPKFFKGVHLQDLDAAEYEEQTALPFNIAAQSEFGAGASHIGEGEIFDEVLTRSRGEFRHTTPSPKINSSTPTPRNNPQSRLSPRPSFNSRVGEFSTEQSPRSGTRGPNSPMAREIRLSTRGVSPLKPDSKPQDKK* 725
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr6g0434 724 PANTHER ANION EXCHANGE PROTEIN 1 704 IPR003020 GO:0005452|GO:0006820|GO:0016020
Tpr6g0434 724 MobiDBLite consensus disorder prediction 649 695 - -
Tpr6g0434 724 Pfam HCO3- transporter family 462 552 IPR011531 GO:0006820|GO:0016021
Tpr6g0434 724 Pfam HCO3- transporter family 202 373 IPR011531 GO:0006820|GO:0016021
Tpr6g0434 724 Pfam HCO3- transporter family 8 180 IPR011531 GO:0006820|GO:0016021
Tpr6g0434 724 PANTHER BORON TRANSPORTER 2-RELATED 1 704 - -
Tpr6g0434 724 MobiDBLite consensus disorder prediction 645 724 - -
Tpr6g0434 724 Gene3D Helical hairpin bin 18 60 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr6g0434 Tpr-Chr6 3525654 3530196 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr6g0434 1 697 Antiporters AT3G62270 81.519 0.0 1158
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr6g0434 K24194 - gmx:100776705 1284.24