Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr6g0432 ATGATGGCATCAGGTGGTGTTGCACCTGCTTCTGGATTTATAGATAAGAATGCAAGTTCTGTTGGTGTTGAAAAGTTGCCTGAAGAGATGAATGACATGAAAATTAGGGATGATAAGGAAATGGAAGCCGCCACCGTGGTAGATGGAAATGGAACAGAAACCGGACATATAATTGTCACAACCATTGGTGGTAAAAATGGCCAGCCAAAGCAGACAATAAGCTACATGGCCGAGCGTGTTGTTGGACATGGATCTTTTGGTGTAGTTTTTCAGGCAAAGTGTTTGGAGACGGGAGAAACTGTGGCCATAAAGAAGGTTCTTCAAGACAAGAGGTACAAGAACCGGGAATTGCAAACTATGCGACTTTTGGACCACCCTAATGTTGTATCTTTGAAGCATTGCTTCTTCTCGACGACTGAAAAAGACGAGCTTTATCTTAACTTGGTGCTTGAGTATGTTCCCGAGACTGCCAGTCGGGTGATCAGACACTACAACAAAATGAATCAAAGAATGCCTATGATATACGTTAAACTCTATTCTTATCAGATTTGCAGAGCACTTGCTTATATTCACAACAGTATTGGAGTATGTCACAGGGATATTAAACCTCAAAATTTGCTGGTCAATCCTCACACTCACCAACTGAAGATATGCGATTTTGGAAGTGCTAAAGTCTTGGTAAAGGGTGAACCAAACATATCTTACATCTGTTCTAGGTACTATAGAGCTCCTGAGCTTATATTCGGTGCAACTGAGTATACCACAGCCATTGACATCTGGTCAGCTGGCTGCGTACTTGGTGAACTTTTGCTTGGCCAGCCGCTCTTTCCTGGTGAGAGTGGAGTAGACCAACTTGTGGAAATCATAAAGGTAATGTGTGTTTTAAACAATATTACTGATATTATCTACCTTGCTACTAACTTGAACATATCAAGATTCATCTTTCCGTTTTGTTTACTGCTATTTTTTATTTCATTAATTCTGAAGAATCGTGGCGTTCACTTGCAGGTTTTAGGTACTCCAACAAGGGAAGAAATCAAGTGTATGAATCCTAATTATACAGAGTTTAAGTTTCCTCAAATCAAAGCTCATCCATGGCACAAGATCTTTCACAAGAGAATGCCACCTGAGGCTGTGGATCTTGTCTCAAGACTATTGCAATACTCTCCAAATCTTCGAAGCACTGCATTGGAGGCACTTGTTCATCCATTCTTTGATGAGCTGCGCGATCCCAACACTAGGTTGCCAAATGGACGTTTCCTTCCTCCATTATTTAACTTCAAAGTCAATGAGCTCAAGGGAGTGCCTTCGGAGATGTTGGTGAAGCTGGTTCCACCTCATGCACGAAAGCAATGTGCTTTGTTCGGATCATCATCATAA 1380 0.4145 MMASGGVAPASGFIDKNASSVGVEKLPEEMNDMKIRDDKEMEAATVVDGNGTETGHIIVTTIGGKNGQPKQTISYMAERVVGHGSFGVVFQAKCLETGETVAIKKVLQDKRYKNRELQTMRLLDHPNVVSLKHCFFSTTEKDELYLNLVLEYVPETASRVIRHYNKMNQRMPMIYVKLYSYQICRALAYIHNSIGVCHRDIKPQNLLVNPHTHQLKICDFGSAKVLVKGEPNISYICSRYYRAPELIFGATEYTTAIDIWSAGCVLGELLLGQPLFPGESGVDQLVEIIKVMCVLNNITDIIYLATNLNISRFIFPFCLLLFFISLILKNRGVHLQVLGTPTREEIKCMNPNYTEFKFPQIKAHPWHKIFHKRMPPEAVDLVSRLLQYSPNLRSTALEALVHPFFDELRDPNTRLPNGRFLPPLFNFKVNELKGVPSEMLVKLVPPHARKQCALFGSSS* 460
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr6g0432 459 ProSiteProfiles Protein kinase domain profile. 75 405 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr6g0432 459 SUPERFAMILY Protein kinase-like (PK-like) 74 431 IPR011009 -
Tpr6g0432 459 ProSitePatterns Serine/Threonine protein kinases active-site signature. 196 208 IPR008271 GO:0004672|GO:0006468
Tpr6g0432 459 CDD STKc_GSK3 70 408 IPR039192 -
Tpr6g0432 459 PANTHER GLYCOGEN SYNTHASE KINASE-3 ALPHA 2 295 - -
Tpr6g0432 459 PANTHER GLYCOGEN SYNTHASE KINASE-3 ALPHA 335 455 - -
Tpr6g0432 459 Gene3D Transferase(Phosphotransferase) domain 1 155 449 - -
Tpr6g0432 459 Gene3D Phosphorylase Kinase; domain 1 59 154 - -
Tpr6g0432 459 Pfam Protein kinase domain 75 405 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr6g0432 459 SMART serkin_6 75 405 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr6g0432 459 PANTHER SHAGGY-RELATED PROTEIN KINASE ALPHA 2 295 - -
Tpr6g0432 459 PANTHER SHAGGY-RELATED PROTEIN KINASE ALPHA 335 455 - -
Tpr6g0432 459 ProSitePatterns Protein kinases ATP-binding region signature. 81 105 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr6g0432 Tpr-Chr6 3511297 3514833 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr6g0432 81 413 Core Cell Cycle Gene Families AT1G76540 29.619 1.03e-46 162
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_GSK Tpr6g0432 Pkinase 5.1e-62 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr6g0432 K00924 - gmx:100788046 756.518