Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr6g0426 ATGGATGATTGTTGTGCTGTTTGCGCCGAGCCATTGGAATGGGTTGCTTACGGACCTTGTTCCCACCGTGAAGTTTGTTCCACTTGTGTCGCTCGTCTCCGTTTCATTTGCGATGATCGCCGTTGTTGTATCTGTAAGACCGAATGCAATCTCATCTTTGTTACAAAGGCTCTAGGAGATTATACAAGGGTGATAGATTTTTCATCCCTGCCGTCTGAGGTAAAGGAAGGCAAGGTTGGACCATATTGGTATCATGAGGATACCAATGGATTTTTTGATGATGTGGACCATTACAAGATGACCAAGGCTATGTGCAGACTTTCATGCAGTGAGTGTGACAAGATGGAGGACCAACCAAATGATGGTCCAAGGCGGCGAGAAAGGTTTAGGAATATAGGGCAGCTGAAGGGTCATTTATTCCACCGTCATAAGTTGCATATGTGCAGTTTGTGTTTGGAGGGAAGGAAGGTATTTATATGTGAGCAAAAACTGTATACTAGAGCCCAGTTGAATCAACACATAAGCACTGGTGATTCCGAGGTGGATGGAAGTGAGAGTGACAGAGGTGGTTTTATGGGGCATCCTATGTGTGAATTTTGCAGAACCCCATTTTATGGGGACAATGAACTGTACACACACATGTCTACAGAACATTATACTTGTCATATATGCCAAAGGCAGCATCCAGGACAGTATGAATACTATAAGAATTACGATGACCTAGAGATCCATTTCCGACAACAGCATTTCTTATGTGAAGATGAGGCTTGCCTTGCCAAGAAATTTATTGTTTTTCAATCTGAATCAGAGATGAAGAGACATAATGCTATGGAACATGGAGGGCGTATGTCACGGTCAAAGCGTAATGCTGCTCTTCAGATACCGACTAGTTTTCGATATAGACACAATAATGAACAGGATCAACGTCGTGGAAGAGGCCGTACGTTTCGTCGTGATCATTCTGAAAATCAACTTTACATGGCCATTGAAGCCAGTTTGGAGACTGCTAATGCTGAGCAAACATATCGTGAGCCAGCTTCAAGTAATGGGCAAATTTCTTATGATGACAGGGATGCAGATATTGATTCCATCATCAATCCATTTGAATCATTAGCTACGGCAGGTTCTGAATCAACTTCAAGATACCGTCAGGCCGTAGGGCACAGCTCTAAACCTTTGGCAGATTCTTCCTTTCCTCCACTTCCCGTAACTTCCAGCAATGGCAAGCAAGGGTCCAAACATGAGTTTGAAGGTTCATCAAGCAATCAGGCCTTAGGGCACAGCTCTAAACCTTTGGCAGGTTCTTCCTTTCCTCCACTTCCTGTAACTTCCAGCAATGGCAAGCAAGGGTCCAAACATGAGTTTGAAGGTTCATCAAGCAATACCTTGGCAGCACGTTTACGTCGGCATGGGAACAAAAATATATCTGTTATTAATTCTGGAAATGCCTGGTCTGTACCAGGCCGTGGACCTGTACAACCATCAAGTACTCCTTCGCAATCTAAAAAGTCAAAAAATCGTGCTCTTGGAGGGTCTCAGAATTCTGTCCAGACAAAGACAGTAATCAACAACGTAATTCCACCATCAAGTTATGCTAATACTATTCAAGCTGCACAGAGAACTGCTAATGGTAGAATCGTTCATTCCGCATCAGCTCCAAACCTCGTTGAGAACAACCCTGTTGGAGTTTCAATTTCTGATTTTCCTCCAGTTTCTGCTGCACAAGGGAGCAAGTTACCTATCAGTAGCCAGCCTCCATTGAATGTGGAAAGTGTTCAGTCTGCCAACAAGTCCTTGGTTGAGAAAATTCGCAGTGCGCTTGATTTTGATGAAGATAGATACACAATATTTAAAGACATATCTGCTCAATATCGCCAAGGCACAATAGATACTGATACATATGTGGATTATGTGCAGCAGTTTGGCTTGTTTGAACTTGTACCTGAGTTGGCAAGACTATGCCCGGATCCGCGGAAGCAGAAAGAACTTGTGGAATCTTACAATGCTGGTTTGCATAGAAATGCTTTTCTAGAAAATGACAGGGTTTATGGCAGTGCTAGCACCCAGCGTAAGGACAATAATGTCGACAAGAAAGGTAAAGGTAAGTCATTAGAGGTTAGGCGGAGTAACTCCACCGAGAGGTTAGCAGATAGCTTTTTAAACACTGTACATCAACTACAGTCAAATTATAAACCTTCAGAAGAGAAGTTGGAGGTGCTATCAAAGGGTGCTTATCGCACAGACAAAGGTAAATTTAAAATCGAGCATCAGATCGGTACAAACTCTAGCAGTCAAAATAAGGTGAAGCTTGGTGGGCAAACTGAAACGTCAAATGACAGTTTATCTAATCATCAAAATAAAGAGGATGGGGGTGGTGGGAACAAGCAACGCAAGAAAGCTTCGAAGTTTCTCAGAGTGCGCCTTGGTGATGGTTCTGCTTCGGCCCTTCTAGATCTTGAAAACTCACAGACTGCATCTGGTCCTGGAACAGACAGTTTAGATGGCAATCAGAATGATTCTGGAGTTGGGCTGCCCGTGCGAGGTGTTTGGCGAAAGGGTGGAGGTCAAAAACTCTTCCCCTAA 2583 0.4352 MDDCCAVCAEPLEWVAYGPCSHREVCSTCVARLRFICDDRRCCICKTECNLIFVTKALGDYTRVIDFSSLPSEVKEGKVGPYWYHEDTNGFFDDVDHYKMTKAMCRLSCSECDKMEDQPNDGPRRRERFRNIGQLKGHLFHRHKLHMCSLCLEGRKVFICEQKLYTRAQLNQHISTGDSEVDGSESDRGGFMGHPMCEFCRTPFYGDNELYTHMSTEHYTCHICQRQHPGQYEYYKNYDDLEIHFRQQHFLCEDEACLAKKFIVFQSESEMKRHNAMEHGGRMSRSKRNAALQIPTSFRYRHNNEQDQRRGRGRTFRRDHSENQLYMAIEASLETANAEQTYREPASSNGQISYDDRDADIDSIINPFESLATAGSESTSRYRQAVGHSSKPLADSSFPPLPVTSSNGKQGSKHEFEGSSSNQALGHSSKPLAGSSFPPLPVTSSNGKQGSKHEFEGSSSNTLAARLRRHGNKNISVINSGNAWSVPGRGPVQPSSTPSQSKKSKNRALGGSQNSVQTKTVINNVIPPSSYANTIQAAQRTANGRIVHSASAPNLVENNPVGVSISDFPPVSAAQGSKLPISSQPPLNVESVQSANKSLVEKIRSALDFDEDRYTIFKDISAQYRQGTIDTDTYVDYVQQFGLFELVPELARLCPDPRKQKELVESYNAGLHRNAFLENDRVYGSASTQRKDNNVDKKGKGKSLEVRRSNSTERLADSFLNTVHQLQSNYKPSEEKLEVLSKGAYRTDKGKFKIEHQIGTNSSSQNKVKLGGQTETSNDSLSNHQNKEDGGGGNKQRKKASKFLRVRLGDGSASALLDLENSQTASGPGTDSLDGNQNDSGVGLPVRGVWRKGGGQKLFP* 861
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr6g0426 860 MobiDBLite consensus disorder prediction 302 321 - -
Tpr6g0426 860 MobiDBLite consensus disorder prediction 478 516 - -
Tpr6g0426 860 MobiDBLite consensus disorder prediction 818 860 - -
Tpr6g0426 860 MobiDBLite consensus disorder prediction 372 431 - -
Tpr6g0426 860 CDD RING-HC_ZNF598 5 46 IPR041888 -
Tpr6g0426 860 MobiDBLite consensus disorder prediction 756 789 - -
Tpr6g0426 860 ProSiteProfiles Zinc finger RING-type profile. 5 46 IPR001841 -
Tpr6g0426 860 PANTHER ZINC FINGER PROTEIN 598 1 413 IPR044288 GO:0061630|GO:0072344
Tpr6g0426 860 PANTHER ZINC FINGER PROTEIN 598 421 858 IPR044288 GO:0061630|GO:0072344
Tpr6g0426 860 MobiDBLite consensus disorder prediction 755 798 - -
Tpr6g0426 860 MobiDBLite consensus disorder prediction 818 839 - -
Tpr6g0426 860 MobiDBLite consensus disorder prediction 399 430 - -
Tpr6g0426 860 MobiDBLite consensus disorder prediction 489 516 - -
Tpr6g0426 860 SMART c2h2final6 107 143 IPR013087 -
Tpr6g0426 860 SMART c2h2final6 219 249 IPR013087 -
Tpr6g0426 860 SMART c2h2final6 195 218 IPR013087 -
Tpr6g0426 860 SMART c2h2final6 250 279 IPR013087 -
Tpr6g0426 860 MobiDBLite consensus disorder prediction 691 710 - -
Tpr6g0426 860 MobiDBLite consensus disorder prediction 682 710 - -
Tpr6g0426 860 PANTHER EBR1 421 858 - -
Tpr6g0426 860 PANTHER EBR1 1 413 - -
Tpr6g0426 860 MobiDBLite consensus disorder prediction 372 386 - -
Tpr6g0426 860 MobiDBLite consensus disorder prediction 300 321 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr6g0426 1 855 C2H2 Transcription Factor Family AT3G62240 52.531 0.0 833
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr6g0426 K22381 - gmx:100780426 1250.34