Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr6g0408 ATGACATTGTCTGTGATTAGAACAAAACGAGACTTGGTTAAACCTGCCAAGGAGACTCTATTTACCATGCTAGATTTATCGGTAATCGATCAATTACCTGTTCTAAGATGCAATGTTAGAACTTTGCATGTGTTTAGACATGGCCCTGAAGCACCAAGGGTCATAAGAGAGGCATTGTCGCTAGCGCTCGTTCCCTACTACCCTCTTGCAGGACGAGTCAAAGAGTCTGAACCTCGGTGCCTACAAATCGAATGCTCAGGTGACGGTGTGTGGTATGTTGAGGCATCAACTGATTGCAAACTTGACTCTGTCAATTTCTTTGATGACATGGAGTCAATTCCATATGGTAATCTTCTTCCCGACGATGTTCACGAGATCAAACACATTGATCCCCTTGTTCAAATGCAGGTGACACAATTTGGTTGTGGGGGTTTTGTGATAGGTTTAGTGTTCAGCCATAGCATATGCGATGGCCTTGGTGCTGCACAATTTCTAAATGCAGTTGGGGAGCTAGCTAGAGGACTTGACAAACCTACCATCAAACCAGTGTGGAATAGGAACTTTGTTCCCTCTCCTCGAGCACCATCACTGCCAAAAATATCTCTTGCTTGTCCACCTCAAATGTCACACTACAATCTAGAGCATTCTAACATAGACATACCTATGGATCAAATCAACCGGCTGAAGAGACAGTTCCAGCAAGTAACTGGACAAAGTTGTTCTACCTTCGAAATTGTTGCTGCATTGTTTTGGAGCAGCAGAACAAGAGCCATAAATTGTGATCCCAATACCAAAGTGAAGCTTGTGTTCTTTGCAAATTGTCGACAACTCATAAACCCTCCTCTACCCAAGGGTTTCTACGGAAACTGTTTCTTCCCAGTGACAACTACAGCTTCATGCAAGTCACTTAGAAAAGCACCAAATATCTTTGAAGTGGTGAAGCTGATCCAAGAAGCAAAGGCCAGGTTACCTTTGGAGTTTGTCAAGTACTTGAATGGTGAACATATAAAAGGTGGTGATGAAATTGAGGAGGATCCGTTTGCACCTACACCAAATTACGCCACACTCTTTATGTCTGAGTGGGGGAGGTTGGGATTCGACAATGTAGACTATCAGTGGGGTCCACCTGTCCAGGTGGTCCCCATTCAAGGGTCTAGCATTGTACCAGCTGGCATTATGCGCTCGCTGCCTCTCCCGAACAGAGGGACTCGTTTGGTTACATGGTGCGTGGAGGAGGCGCATCGCCTTCCCTTCATTGATGAAATACATGGTCTTATAAAGCAGCAACTGTTATAA 1296 0.4468 MTLSVIRTKRDLVKPAKETLFTMLDLSVIDQLPVLRCNVRTLHVFRHGPEAPRVIREALSLALVPYYPLAGRVKESEPRCLQIECSGDGVWYVEASTDCKLDSVNFFDDMESIPYGNLLPDDVHEIKHIDPLVQMQVTQFGCGGFVIGLVFSHSICDGLGAAQFLNAVGELARGLDKPTIKPVWNRNFVPSPRAPSLPKISLACPPQMSHYNLEHSNIDIPMDQINRLKRQFQQVTGQSCSTFEIVAALFWSSRTRAINCDPNTKVKLVFFANCRQLINPPLPKGFYGNCFFPVTTTASCKSLRKAPNIFEVVKLIQEAKARLPLEFVKYLNGEHIKGGDEIEEDPFAPTPNYATLFMSEWGRLGFDNVDYQWGPPVQVVPIQGSSIVPAGIMRSLPLPNRGTRLVTWCVEEAHRLPFIDEIHGLIKQQLL* 432
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr6g0408 431 Pfam Transferase family 4 382 - -
Tpr6g0408 431 PANTHER ACYL TRANSFERASE 4 1 423 - -
Tpr6g0408 431 PANTHER ACYL TRANSFERASE 4 1 423 - -
Tpr6g0408 431 Gene3D - 2 202 IPR023213 -
Tpr6g0408 431 Gene3D - 203 418 IPR023213 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr6g0408 Tpr-Chr6 3353896 3355729 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr6g0408 12 414 Monolignol Biosynthesis Gene Families AT5G48930 28.868 1.86e-40 147
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr6g0408 - - gmx:100783128 613.609