Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr6g0373 ATGGGAACAGCTACTTTTGTTGATATCATTCTTGCCATCCTCCTCCCACCTCTTGGTGTCTTCCTCAAATTTGGCTGTGAAGTTGAGTTCTGGATCTGTTTGGTGCTTACCCTTTTTGGATATCTTCCTGGAATTATCTATGCTATCTATATTATCACCAAGTGA 165 0.4061 MGTATFVDIILAILLPPLGVFLKFGCEVEFWICLVLTLFGYLPGIIYAIYIITK* 55
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr6g0373 54 Pfam Proteolipid membrane potential modulator 6 52 IPR000612 GO:0016021
Tpr6g0373 54 ProSitePatterns Uncharacterized protein family UPF0057 signature. 10 25 IPR000612 GO:0016021
Tpr6g0373 54 PANTHER HYDROPHOBIC PROTEIN RCI2 LOW TEMPERATURE AND SALT RESPONSIVE PROTEIN LTI6 -RELATED 1 54 IPR000612 GO:0016021
Tpr6g0373 54 PANTHER HYDROPHOBIC PROTEIN RCI2B 1 54 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr6g0373 Tpr-Chr6 2990955 2992595 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr6g0373 1 54 RCI2 Gene Family AT3G05890 87.037 1.60e-29 96.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr6g0373 - - egt:105978145 108.612