Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr6g0372 ATGGGTACAGCTACCTGCGTCGACATCATTCTTGCCATCATCCTTCCACCTCTTGGTGTCTTCCTCAGGTTTGGCTGCAAGGTGGAGTTCTGGATCTGTTTGATTCTAACCATTTTGGGCTATCTTCCTGGAATCATCTATGCTATATACGCTATCACTAAGTGA 165 0.4545 MGTATCVDIILAIILPPLGVFLRFGCKVEFWICLILTILGYLPGIIYAIYAITK* 55
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr6g0372 54 ProSitePatterns Uncharacterized protein family UPF0057 signature. 10 25 IPR000612 GO:0016021
Tpr6g0372 54 PANTHER HYDROPHOBIC PROTEIN RCI2B 1 54 - -
Tpr6g0372 54 PANTHER HYDROPHOBIC PROTEIN RCI2 LOW TEMPERATURE AND SALT RESPONSIVE PROTEIN LTI6 -RELATED 1 54 IPR000612 GO:0016021
Tpr6g0372 54 Pfam Proteolipid membrane potential modulator 6 52 IPR000612 GO:0016021
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr6g0372 Tpr-Chr6 2986283 2988002 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr6g0372 1 54 RCI2 Gene Family AT3G05890 83.333 2.22e-27 91.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr6g0372 - - aof:109836707 108.612