Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr6g0367 ATGAAACAACAGAAATATGGTGATTTTGCAAATGTTCATAATCAAATGGACGATGATTCAAAAGAGGAAGAGGAATTAGTCTCAAACATAGTAATCATGGGTGTCTCCTTGTTGCTTCTTGGATTGATAACCATTGCTTTTGTTACCAACATAGGTGGCTCCAAAACCGCACCTGTTCTTAAGAACCTTGAATCTATCTGTTCAAAAACAGATGCACCAGATTCTTGTCTTCATGTCTTAAAACATGTAGGTGAAAGAGCCACGGTTTTGGATTATATAAAAGCTTCTCTTAATGCAACCCTTGAAGAATTTTTGGTTGTTAACATACCTAAACCTTTTGTTGAAAAAGTTCTAACACCTAAGCAAGCACAATCATATAGAGATTGTTTGGAATTGTTGAATATGGGAATAGATGAACTAAACTTTGTGTATATGATCGCGAATTCGTCTGTTGAAGAAGTAATGCGAGTAGACCCGAAAGATATTATGAATAGCTTAAGTGCTATCATTTCATATCAACAAACTTGTGCTAACGAATTGGTGAGAACAGATACTTATGAGATTTTCGGGTATTCTTTGAGCATACCAACTCTTTTGACAAAGATGACATTAGCCATTGTTGAGAATTTCGTCAAGATTCCAGAATTCGACGATAAAGACCTTGATGGGTATAAAAAATTGCAATCAAAAGACTATGAACACACATTTAAGGGAGTTGAGAAGACAATAAAAATTGTGGCTAAAGATGGAAGTGGGAATTTTACAAGTATAAATGAGTCAATCCATGAATGTATAATGAATATAGAGGAGTCATGTGTTATTTATGTGAAGAAAGGTAAATATGAGGAGAGAGTGGTGATACCTAATAATTTAGGCCAAGTGATCATGTATGGTGATGGCCCTATGGATACCATTGTTACTGGAATCACCATAGGAGACCCCATGCTTACAACTCCCTTTCAGTCAGCTACTTTTGTGGTAAAGGGGAAAGGATTTATCTGCAAAAATATGGGATTCATTGCTCCAGCTAATATAACAGGAGCACCAGCACTCCTTGTACTTTCTGATCGGGCAGTATTCTTCAACTGCAAAATTGATGGCGAAGAAGGAAGTTTATACGCAGTTGCGCAACGCCAATTCTATAGAGACTGCGAGATTCGCGGTAGTGTAGACATCATCAAAGGAGATTCAGCAGCCTTAATTCAAAACTCAATAATCACTGTGAAGCATCGAAATTCAACTAACTTAGCTTTAAGAAAAAATGTGGTGAGTGCTCAAACAAGATTAGACAATTATGAAAGAACTGGTCTTGTGATTCAAAACTGCACCGTTGTAGCAGAACAAGGTCATGATAGTCTTGTTCGTTCGACGTGTTTAGGAACTCCGCGTAATGAATATTCAAGAACAATCATAATGGAATCGTTTCTCGGTGATGTTATACGTCCAAAAGGTTGGTGTAAATGGAGTGACAATTATGGAATTGATACAGCAACATTTAGAGAGTATAATAACAGAGGACCTGGTGCAGGAACTAATAAGAGGGTGCATTGGGAAAGTTATAGAACAATTTCTGAGAATCAGAGACTTGATATGAAATTTTTTACTGCTGGTGAGTTTATTCAAGCAGATCAATGGTTGATACATACAGGCATTCCATATGAATCTGGATTTCTCTTTCATACATAG 1686 0.3671 MKQQKYGDFANVHNQMDDDSKEEEELVSNIVIMGVSLLLLGLITIAFVTNIGGSKTAPVLKNLESICSKTDAPDSCLHVLKHVGERATVLDYIKASLNATLEEFLVVNIPKPFVEKVLTPKQAQSYRDCLELLNMGIDELNFVYMIANSSVEEVMRVDPKDIMNSLSAIISYQQTCANELVRTDTYEIFGYSLSIPTLLTKMTLAIVENFVKIPEFDDKDLDGYKKLQSKDYEHTFKGVEKTIKIVAKDGSGNFTSINESIHECIMNIEESCVIYVKKGKYEERVVIPNNLGQVIMYGDGPMDTIVTGITIGDPMLTTPFQSATFVVKGKGFICKNMGFIAPANITGAPALLVLSDRAVFFNCKIDGEEGSLYAVAQRQFYRDCEIRGSVDIIKGDSAALIQNSIITVKHRNSTNLALRKNVVSAQTRLDNYERTGLVIQNCTVVAEQGHDSLVRSTCLGTPRNEYSRTIIMESFLGDVIRPKGWCKWSDNYGIDTATFREYNNRGPGAGTNKRVHWESYRTISENQRLDMKFFTAGEFIQADQWLIHTGIPYESGFLFHT* 562
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr6g0367 561 SMART PMEI_2 58 206 IPR006501 GO:0004857
Tpr6g0367 561 Gene3D Invertase/pectin methylesterase inhibitor family protein 60 210 IPR035513 -
Tpr6g0367 561 Coils Coil 415 435 - -
Tpr6g0367 561 PANTHER PECTINESTERASE 17 558 - -
Tpr6g0367 561 Pfam Pectinesterase 245 543 IPR000070 GO:0030599|GO:0042545
Tpr6g0367 561 PANTHER PECTINESTERASE/PECTINESTERASE INHIBITOR 17 558 - -
Tpr6g0367 561 SUPERFAMILY Pectin lyase-like 242 555 IPR011050 -
Tpr6g0367 561 CDD PMEI-like_3 65 212 - -
Tpr6g0367 561 Pfam Plant invertase/pectin methylesterase inhibitor 63 181 IPR006501 GO:0004857
Tpr6g0367 561 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 63 210 IPR035513 -
Tpr6g0367 561 Gene3D - 243 559 IPR012334 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr6g0367 Tpr-Chr6 2947656 2949679 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr6g0367 61 557 Carbohydrate Esterase AT2G26450 33.397 1.01e-81 266
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr6g0367 K01051 - gmx:102665007 613.994