Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr6g0366 ATGGGCGGAGGTGGACCACCGACGATTAACACCAACGCGGAAGCGCAGTATACGACGGCGAAGACTTCGGTATGGTGGGATATAGAGAACTGTCATGTTCCAAAAGGTTGCGATCCACATGCTATTGCACAAAATATCAGTTCAGCTCTTGTTCGTATGAACTATTGTGGTCCCGTTTCCATCTCCGCCTATGGTGATACCACTCGTATTACCGCGTCTGTACAACACGCTCTTTCTAGCACCGGAATTTCGCTCAATCATGTTCCCGCCGGTTTGAAAGATGCAAGTGATAAGAAGATCCTTGTCGACATGCTGTTTTGGGCAGTGGACAACCCTGCGCCTGCTAATTATTTATTGATTTCGGGTGATCGAGATTTCTCTAATGCCCTCCATCAACTGCGAATGAGGAGGTATAATATTCTTCTTGCGCAACCTCAAAATGCATCTGTACCCCTAGTTGCAGCTGCTAAGAGTGTATGGCTTTGGACTATTCTCTTAGCTGGAGGAGCTCCATTAGAGTCACACCAACTGGGTAATACTAGCGTCTTACAATCTTCTGAAACTTTACAAATTCCTGTCTCAAATGCTGCTCAGACACAGCAACAGGGAGGTCCCTATTCCGATGTTCATGCAGGAAATTCAAAATTCCAAAATGGAGGAAGGGGATTTGATTCTAGATATCAGGGGCGACCAACTTGGAGAAACCCGAGTCAACAAAATGGACCGAAAGCCATGAATCCACCCCCAGTTGGACCTCAAGATAACCGTAATAACGTAAACAATTATCGACCTGCCAACTATAATCCAAATGTTCCTCCAAGCGGACCCGCCACAAATTTTGTCCGCCCCAATTCTGATCAGTTATGGAGCAATAATGGTAATCAACAAGGAAATCATCAAAATGGTAATCAACAGGGAAATCATCAAAATCCCTATTCCCAGCCATCAAGACCAAACGACTTTCCATTGCAACCTCCTTTTGCACCTAGTAATTCATATTCTCCAAATTCCCATGCTTTTGCAACTACACCGGTGCCACCTAGGACTAGTAGCCCCAATTTCAGTACAGGACCGCCTACAACTGTGCCAGATATTGGTAATCTGAACATTTCTAGTTATCCTAGTAATGTTCATAACCACCGTATTGTTCCGCAACGGAGTGGAGAGACGAAACCGAATCATAAGAGTAGTGCTCCACTTCCGGTAAGATCAACGAATGAACAAAATGGACATATGGTGCATAGCAGTAGCACACAAGGCTATCCACATGGTCCAGAATATCAACCTACACCACCGGCAGCAATGGGTAATAATAAGCCTCCTGCTAATGGTAAGTGGGGATCTTCAGGAATTCCTAAACCTTCTGAATACGTACAAGGTCTTATAGGGGTTGTTTTACTTGCCCTGAACTCATTAAAAAATGCAAAGATGGCGCCAACTGAGAAGAATATAACTGATAGCATCCGTTATGGAGATCCCAAGCATCGCAACACTGATGTTAAGAAGGCTCTGGAGAGTGCAATTGAGCAGCAGATGGTGGTGAAACAGACTTTAGGTTCTGTGACATTGTACATTGGTAAGAATGATAAACTTTGGAAGTGTGTAAATCCTATTAGTGGAAATCCTAAACAGTACCCAAATGAAATTTGGGACGAAATTCAAATTTTTTTAACAACCCCTGCTGGAAGATCTGCTATTATGGGTACACAGTGCAAGTATGAAGCAGGTGTTGTGATAAAGAACATGTGCCTTAAAGATGTTGCTTTGGGCGAAGTCCTTCAGATATTGAACATGTTAATTCAACATAAAAAATGGATAGTTCATCAGCAGGCTGGCTGGCAACCACTCATCCTTACTCTTCCTGGGTCAAACTCCGATTCAGGGGACACCGCTAGCACATAG 1902 0.4385 MGGGGPPTINTNAEAQYTTAKTSVWWDIENCHVPKGCDPHAIAQNISSALVRMNYCGPVSISAYGDTTRITASVQHALSSTGISLNHVPAGLKDASDKKILVDMLFWAVDNPAPANYLLISGDRDFSNALHQLRMRRYNILLAQPQNASVPLVAAAKSVWLWTILLAGGAPLESHQLGNTSVLQSSETLQIPVSNAAQTQQQGGPYSDVHAGNSKFQNGGRGFDSRYQGRPTWRNPSQQNGPKAMNPPPVGPQDNRNNVNNYRPANYNPNVPPSGPATNFVRPNSDQLWSNNGNQQGNHQNGNQQGNHQNPYSQPSRPNDFPLQPPFAPSNSYSPNSHAFATTPVPPRTSSPNFSTGPPTTVPDIGNLNISSYPSNVHNHRIVPQRSGETKPNHKSSAPLPVRSTNEQNGHMVHSSSTQGYPHGPEYQPTPPAAMGNNKPPANGKWGSSGIPKPSEYVQGLIGVVLLALNSLKNAKMAPTEKNITDSIRYGDPKHRNTDVKKALESAIEQQMVVKQTLGSVTLYIGKNDKLWKCVNPISGNPKQYPNEIWDEIQIFLTTPAGRSAIMGTQCKYEAGVVIKNMCLKDVALGEVLQILNMLIQHKKWIVHQQAGWQPLILTLPGSNSDSGDTAST* 634
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr6g0366 633 Gene3D - 12 163 - -
Tpr6g0366 633 Pfam NYN domain 21 157 IPR021139 GO:0004540
Tpr6g0366 633 PANTHER ACID BINDING PROTEIN, PUTATIVE-RELATED 11 618 - -
Tpr6g0366 633 MobiDBLite consensus disorder prediction 196 221 - -
Tpr6g0366 633 CDD PIN_limkain_b1_N_like 21 145 - -
Tpr6g0366 633 MobiDBLite consensus disorder prediction 389 421 - -
Tpr6g0366 633 MobiDBLite consensus disorder prediction 251 317 - -
Tpr6g0366 633 MobiDBLite consensus disorder prediction 330 368 - -
Tpr6g0366 633 PANTHER LIMKAIN B LKAP 11 618 IPR024768 GO:0005777|GO:0010468|GO:1903231
Tpr6g0366 633 MobiDBLite consensus disorder prediction 383 421 - -
Tpr6g0366 633 MobiDBLite consensus disorder prediction 196 368 - -
Tpr6g0366 633 Pfam OST-HTH Associated domain 570 617 IPR025677 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr6g0366 Tpr-Chr6 2941872 2946173 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr6g0366 11 215 C2H2 Transcription Factor Family AT5G61190 67.143 8.77e-83 279
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr6g0366 - - gmx:100794608 973.385
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr6g0366 6 2941872 2946173 Tpr6g0366 6 2941872 2946173 ECH