Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr6g0355 ATGGCAAGTGTTGCTAGTTTCATTCCATTAATATTTATGTTTCTTACTCAATTAGCCTATGCTGGAATGAATATTACCTCAAAGCTTGCTATTCTTGGTGGCATGAACCCTCTTATCCTTGTTGCTTATCGTCAAATCTTTGGAACTATTGCCATTGCTCCCTTTGCATATTTTCTTGAACGGGATATGGTTCCAAGGATGACAAAGCGCATTATGGTTCAGATTTTGTTATCTTCCATCACAGGAGTAACAGGAAATCAAGTTCTGTATTTCGTGGGGCTAAAATATTCAACAGCAACAATTGCATGTGCACTCACCAATTTGCTCCCAGCTTTTACATTTGTTCTTGCAATCTTATTCAGACAAGAGAAATTGGGAATAAAGACGAAGAGTGGTGTAGCAAAGGTTGTAGGAACCATTTTGTGTGTTGGTGGAGCAATACTTTTATCATTTTACCATGGAAAAGTAATTAGTATTCCAGACTCAAGTATTCATTGGAGTTATGCACAAAGAGTTCAAGGTGGTAGTGGTGGTGATTCCTCCTCAAACTCCCTTGTTGGCCCTATTGCTTTAATTCTTAGCGCTCTTATTTGGTCATTATGGTTCATCATTCAAGCAGATATGTGCAGGACTTTTCCAGTACCATATACAAGCACAGCATACATGTTATTCTTAGCAAGTTTTCAATGTGTGATCATTGCTTTGTTTTTTGATCATAGTGTCTCATCTTGGTCACTCGTTGATACTATGAGACTTACCTCTTCTCTTTATTCGGGAGTAATTTGCACTGGGCTTACATATTGTATACTTTCATGGACCATTGAAAAGAAAGGCCCACTCTATGTGTCTGTATTTACCCCAATGCAGCTTATTCTCACAGCTATGATTAGTTGGGCTTTTCTCCGGGAGAAATTATTCCTTGGAACGGCTATAGGGTCTGTTCTGATAGTTGGTGGGCTTTATGCTGTTTTATGGGGAAAGAGCAAAGAGATGGATAGTAACAGAGTGGATGATGCTACTGATGATGAAGCATTGCCACAAGAAGGAATTAAGAAGAATGATATGGAAATGCAATCTTATTTACCATCCAATGGTAACGGCCACATATGA 1110 0.3865 MASVASFIPLIFMFLTQLAYAGMNITSKLAILGGMNPLILVAYRQIFGTIAIAPFAYFLERDMVPRMTKRIMVQILLSSITGVTGNQVLYFVGLKYSTATIACALTNLLPAFTFVLAILFRQEKLGIKTKSGVAKVVGTILCVGGAILLSFYHGKVISIPDSSIHWSYAQRVQGGSGGDSSSNSLVGPIALILSALIWSLWFIIQADMCRTFPVPYTSTAYMLFLASFQCVIIALFFDHSVSSWSLVDTMRLTSSLYSGVICTGLTYCILSWTIEKKGPLYVSVFTPMQLILTAMISWAFLREKLFLGTAIGSVLIVGGLYAVLWGKSKEMDSNRVDDATDDEALPQEGIKKNDMEMQSYLPSNGNGHI* 370
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr6g0355 369 PANTHER WAT1-RELATED PROTEIN 10 356 - -
Tpr6g0355 369 PANTHER WAT1-RELATED PROTEIN 10 356 IPR030184 GO:0016021|GO:0022857
Tpr6g0355 369 SUPERFAMILY Multidrug resistance efflux transporter EmrE 221 329 - -
Tpr6g0355 369 Pfam EamA-like transporter family 8 150 IPR000620 GO:0016020|GO:0016021
Tpr6g0355 369 Pfam EamA-like transporter family 187 324 IPR000620 GO:0016020|GO:0016021
Tpr6g0355 369 SUPERFAMILY Multidrug resistance efflux transporter EmrE 43 151 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr6g0355 Tpr-Chr6 2840069 2843617 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr6g0355 8 367 Nodulin-like Gene Family AT1G09380 52.603 1.21e-134 387
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr6g0355 - - gmx:100801512 481.485