Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr6g0354 ATGTTTCTTACTCAATTAGCCTATGCTGGAATGAATATTACCTCAAAGCTTGCTATTCTTGGTGGCATGAACCCTCTTATCCTTGTTGCTTATCGTCAAATCTTTGGAACTATTGCCATTGCTCCCTTTGCATATTTTCTTGAACGGGATATGGTTCCAAGGATGACAAAGCGCATTATGGTTCAGATTTTGTTATCTTCCATCACAGGAGTAACAGGAAATCAAGTTCTGTATTTCGTGGGGCTAAAATATTCAACAGCAACAATTGCATGTGCACTCACCAATTTGCTCCCAGCTTTTACATTTGTTCTTGCAATCTTATTCAGACAAGAGAAATTGGGAATAAAGACGAAGAGTGGTGTAGCAAAGGTTGTAGGAACCATTTTGTGTGTTGGTGGAGCAATACTTTTATCATTTTACCATGGAAAAGTAATTAGTATTCCAGACTCAAGTATTCATTGGAGTTATGCACAAAGAGTTCAAGGTGGTAGTGGTGGTGATTCCTCCTCAAACTCCCTTGTTGGCCCTATTGCTTTAATTCTTAGCGCTCTTATTTGGTCATTATGGTTCATCATTCAAGCAGATATGTGCAGGACTTTTCCAGTACCATATACAAGCACAGCATACATGTTATTCTTAGCAAGTTTTCAATGTGTGATCATTGCTTTGTTTTTTGATCATAGTGTCTCATCTTGGTCACTCGTTGATACTATGAGACTTACCTCTTCTCTTTATTCGGGAGTAATTTGCACTGGGCTTACATATTGTATACTTTCATGGACCATTGAAAAGAAAGGCCCACTCTATGTGTCTGTATTTACCCCAATGCAGCTTATCCTCACTGCTATGATTAGTTGGGCTTTTCTCCGGGAGAAATTATTCCTTGGAACGGCTATAGGGTCTGTTCTCATAGTTGGTGGGCTTTATGCTGTTTTATGGGGGAAGAGCAAAGAGATGGATAGTAACAGAGTGGATGATGCTACTGATGATAAAGCATTGCCACAAGAAGGAATTAAGAAGAATGATATGGAAATGCAATCTTATTTACCATCCAATGGTAACGGTCATATATGA 1074 0.3883 MFLTQLAYAGMNITSKLAILGGMNPLILVAYRQIFGTIAIAPFAYFLERDMVPRMTKRIMVQILLSSITGVTGNQVLYFVGLKYSTATIACALTNLLPAFTFVLAILFRQEKLGIKTKSGVAKVVGTILCVGGAILLSFYHGKVISIPDSSIHWSYAQRVQGGSGGDSSSNSLVGPIALILSALIWSLWFIIQADMCRTFPVPYTSTAYMLFLASFQCVIIALFFDHSVSSWSLVDTMRLTSSLYSGVICTGLTYCILSWTIEKKGPLYVSVFTPMQLILTAMISWAFLREKLFLGTAIGSVLIVGGLYAVLWGKSKEMDSNRVDDATDDKALPQEGIKKNDMEMQSYLPSNGNGHI* 358
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr6g0354 357 Pfam EamA-like transporter family 2 138 IPR000620 GO:0016020|GO:0016021
Tpr6g0354 357 Pfam EamA-like transporter family 175 312 IPR000620 GO:0016020|GO:0016021
Tpr6g0354 357 PANTHER WAT1-RELATED PROTEIN 3 346 IPR030184 GO:0016021|GO:0022857
Tpr6g0354 357 SUPERFAMILY Multidrug resistance efflux transporter EmrE 209 317 - -
Tpr6g0354 357 PANTHER WAT1-RELATED PROTEIN 3 346 - -
Tpr6g0354 357 SUPERFAMILY Multidrug resistance efflux transporter EmrE 31 139 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr6g0354 Tpr-Chr6 2832249 2837474 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr6g0354 1 355 Nodulin-like Gene Family AT1G09380 52.778 1.22e-133 384
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr6g0354 - - gmx:100801512 478.018