Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr6g0345 ATGCCAGCTGCAAAATTCGACCTAGGAGCCGTTCCGTTCAACCCCGACGGATGGGGCCCACTTGATTCCACCGGCGACAACACCAACGTCCCTTTCGCTCCCTTCTCCCGTTCCGACAAATTAGGTCGAATCGCCGATTGGACTCGCAATTTCAACCCTACCCGATCCAAAAACCCAGCCGATTCCGCCTTCGATTTCACCTCCGACGCTTCTTTCCCTGCCTTCGCCGACGACGACTCCTCTTTCCGTCTCGTCGACGGTAAACCCCCACCGCGTCCCAAATTCGGTCCCAAATGGCGCTTCCAACGCCAACTTCAGCTCCCTCAGCGCCGCGACGAAGAAGTCGAAGCTAGAAAACGTGAACAAGAGAAAGAAAGAGCTCGTCGCGATCGCCATTATCAGAATCGTTCAAACCCTAGTAACCATCGCCGTGAACTTTTCAAATCATCGGTTGATATTCAACCGGAATGGAATATGCACGAGCAGATCCCATTCTCCACTTTCACAAAACTCTCATTCTCCGTCTCTGAACCCGAAGATCTTCTCCTCTGTGGCGCTCTCGAGGGTTACGATCGAACCTACGATCGAATTGCTCCCAAAAGTGAACGCCGTCTTGAGAGATTCAAGAATCGGAATTTCTTCAAAGTTACCACCACTGATGACCCTGTTATTCGTAGACTCGCTAATGAAGATAAAGCTACGGTTTTTGCTACCGATGCTATTCTTGCCACTCTTATGTGTGCTCCTAGGTCTGTTTACTCATGGGATATTGTTGTTCAGCGTGTTGGGAATAAGCTTTTCTTTGATAAGCGTGATGGGTCGCAGTTGGATTTGCTTTCTGTTCATGAAACTTCTCAGGAGCCATTGCCTGAAGCTAAAGATGATATTAACTCGGCTCATTCTCTTAGTGTTGAGGCCTCTTATATTAATCAGAATTTCTCTCAGCAGGTTTTGATTAGGGATGGGAAAAAGGAGACTTTTGAAGAGCCTAATCCTTTTGCTAATGAGGGTGAAGAAGTTGCTTCTGTTGGTTATAGGTATAGGAGATGGAAGCTTGATAATGATATGTATCTTGTTGCTAGGTGTGAGGTTCATAGTGTTGTTGAGCTTAATAACCAGAGGTCTTTCCTTACTTTGAATGCTTTGAATGAGTTTGATCCTAAGTATACTGGTGTTGATTGGAGGCAGAAGTTGGAGACACAAAGAGGTGCTGTTTTGGCTACTGAACTTAAGAATAATGCTAATAAGTTGGCTAAATGGACTGCACAAGCTCTTTTGGCAAGTGCTGATATGATGAAATTGGGATATGTTTCTCGGATTCATCCTCGTGATCATTTTAATCATGTGATCTTGGGTGTGGTTGGATATAAACCTAAGGATTTTGCTGCACAAATTAATTTGAATCCTAGTAATATGTGGGGGATTGTGAAGTCTATTGTGGACTTGTGCATGAAATTGAATGAGGGGAAATATGTTCTTGTGAAGGATCCAACTAAGCCTCAGGTTAGGATTTATGAGGTTCCAGGTGATGCATTTGAGAACGACTATGTGGAGGAACCAATACCTGAAGAGGAGCAAGTTCAACCACAATCAGAGGGTGCTGATGATGCTGATGGTGTAGATGCTGCTGCTTCTGGTACCAATGATGGGGAAGATAAGAAGATTGAGGGTCAAGCTTAA 1680 0.4506 MPAAKFDLGAVPFNPDGWGPLDSTGDNTNVPFAPFSRSDKLGRIADWTRNFNPTRSKNPADSAFDFTSDASFPAFADDDSSFRLVDGKPPPRPKFGPKWRFQRQLQLPQRRDEEVEARKREQEKERARRDRHYQNRSNPSNHRRELFKSSVDIQPEWNMHEQIPFSTFTKLSFSVSEPEDLLLCGALEGYDRTYDRIAPKSERRLERFKNRNFFKVTTTDDPVIRRLANEDKATVFATDAILATLMCAPRSVYSWDIVVQRVGNKLFFDKRDGSQLDLLSVHETSQEPLPEAKDDINSAHSLSVEASYINQNFSQQVLIRDGKKETFEEPNPFANEGEEVASVGYRYRRWKLDNDMYLVARCEVHSVVELNNQRSFLTLNALNEFDPKYTGVDWRQKLETQRGAVLATELKNNANKLAKWTAQALLASADMMKLGYVSRIHPRDHFNHVILGVVGYKPKDFAAQINLNPSNMWGIVKSIVDLCMKLNEGKYVLVKDPTKPQVRIYEVPGDAFENDYVEEPIPEEEQVQPQSEGADDADGVDAAASGTNDGEDKKIEGQA* 560
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr6g0345 559 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 3 SUBUNIT D 6 541 - -
Tpr6g0345 559 PIRSF Transl_init_eIF3d 1 536 IPR007783 GO:0003743|GO:0005737|GO:0005852
Tpr6g0345 559 Pfam Eukaryotic translation initiation factor 3 subunit 7 (eIF-3) 7 506 IPR007783 GO:0003743|GO:0005737|GO:0005852
Tpr6g0345 559 Coils Coil 110 130 - -
Tpr6g0345 559 MobiDBLite consensus disorder prediction 518 559 - -
Tpr6g0345 559 MobiDBLite consensus disorder prediction 106 145 - -
Tpr6g0345 559 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 3 SUBUNIT 7 6 541 IPR007783 GO:0003743|GO:0005737|GO:0005852
Tpr6g0345 559 Hamap Eukaryotic translation initiation factor 3 subunit D [EIF3D]. 4 518 IPR007783 GO:0003743|GO:0005737|GO:0005852
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr6g0345 Tpr-Chr6 2778308 2783502 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr6g0345 1 554 Eukaryotic Initiation Factors Gene Family AT4G20980 74.150 0.0 875
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr6g0345 K03251 - gmx:100799613 912.524