Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr6g0343 ATGGTATCTAACAGAAAATTTCACCAGGAGCACAAAGACACTGGTAAAATTCCTATTCCTAATCATGGGTCTAAATGGAATCATGGTGTTGCAAAACAACCACCAATCAGTGACCTTAGATATGTGATAAACACTCTAAGGGCTAGTGGTAACGGTTCCATCTACTTGGAAAATTTCATTAGAGGAGTGGTAAGAGATGTGGTGGAAAGCAAAATCCAAGAGCGCCTACTTTCAAGCAGTGAAAAGTTCAATGAGGCTGGCAAATCTGGAGCCAGAACCTTAGAGTTACATTTTATTAATAATAAGTTACCTGATACAATTTTTACTCAATCTAATATAATAGCAAAGGGTGAACCACCTCTCCAAGTTGCTCTATTTGATGTTGGATCTAAGTCAATAGTTAATGATGGTACCTTATCTTCAACAAAGATAGAGATTTGTGCACTTGATGGTGAATTTGGATCTTATGGTGGCAGTGAAGATTGGACTGAAACTGAATTCAATGATAATATCTTGCGCGAAAGAGATGGTAAAAGGCCATTATTGGTTGGTGACAAGATTATTACTCTTGAAAAGGGAGTTGCTTCCATCTCTAAAATTATGTTTACTGATAATTCAAAATGGTTAAGAGGCAAAAAGTTCAGGTTAGGGGTTAAAGCTATGCAAAATGGAGAAAACATTAAGGAAGGTAGAAGTCAACCTTTTAGGGTCAAAGATAACAGAGGAGAATCCTACCAGAAACATTACCCTCCATACTTGAATGATGATGTTTGGCGTTTGGAGAAAATCGCTAAAGATGGAGAATTCCACAAGCGGCTCTCTAACCATGGAATTCACACTGTTAAGGATCTCTTGAAGTTACTCATAATCAATGAATCTTCATTACATAAGATATTTGGCAAGATTCCAAACAAGTCTTGGTTAGCAATTATCGAACATGCCAAGAATTGTATCGTGGATGATTACAAGCTTTATAGCTATCTGGCAAATGGGCAACAAATAGCGCTGATATTCAATGCCATCTACAAACTTGTGGGAGTGACAAATGATGCACAAAATTACTATTTACCAGAGACTGTCACACCCAACCTGCAGAATATTGTAAAAATTTTGAAGCAGGATGCTTACAAAAATGTGGATAATAATTTGGAACCAATCGATGAAGCTAAATTGAACTCTATAAGCCTAGCAGCATGTTTAAAATCAGCAGCACAATCCGACGCTCCAGTTCAAGGTCTACAATATACTGATATCTCTACAGCACAAGGTCAAAGAGAAACAGGACCATGTGATGCTCAGCCATGTACCTCTACTTCATATGTTAATGAAGGAATGAATAATTGCCAAATCAATGTTGATAATTCAGTGGCAAACATCGAAGAAATACTGAATTTCTTAAATAACGTTTCATTCGATTTTTCTGATGGAGCAGAGTGTAGCACCCGTGTTAATTTCGTCAATTCTGTTACGGATATATCAAACAACGGGAAACCAAAAGCAGTATGGCGTAAGATTCGCGCTGTTATCAAATGGGGAATATCAGTGAGAAAGGTTGCAGCTGCAAAGAGGAGTTATTAG 1578 0.3739 MVSNRKFHQEHKDTGKIPIPNHGSKWNHGVAKQPPISDLRYVINTLRASGNGSIYLENFIRGVVRDVVESKIQERLLSSSEKFNEAGKSGARTLELHFINNKLPDTIFTQSNIIAKGEPPLQVALFDVGSKSIVNDGTLSSTKIEICALDGEFGSYGGSEDWTETEFNDNILRERDGKRPLLVGDKIITLEKGVASISKIMFTDNSKWLRGKKFRLGVKAMQNGENIKEGRSQPFRVKDNRGESYQKHYPPYLNDDVWRLEKIAKDGEFHKRLSNHGIHTVKDLLKLLIINESSLHKIFGKIPNKSWLAIIEHAKNCIVDDYKLYSYLANGQQIALIFNAIYKLVGVTNDAQNYYLPETVTPNLQNIVKILKQDAYKNVDNNLEPIDEAKLNSISLAACLKSAAQSDAPVQGLQYTDISTAQGQRETGPCDAQPCTSTSYVNEGMNNCQINVDNSVANIEEILNFLNNVSFDFSDGAECSTRVNFVNSVTDISNNGKPKAVWRKIRAVIKWGISVRKVAAAKRSY* 526
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr6g0343 525 PANTHER CALMODULIN-BINDING PROTEIN 1 523 - -
Tpr6g0343 525 MobiDBLite consensus disorder prediction 1 26 - -
Tpr6g0343 525 Pfam Calmodulin binding protein central domain 253 317 IPR046830 -
Tpr6g0343 525 Pfam Calmodulin binding protein C-terminal domain 323 381 IPR046829 -
Tpr6g0343 525 Pfam Calmodulin binding protein-like N-terminal domain 94 240 IPR046831 -
Tpr6g0343 525 PANTHER OS02G0177800 PROTEIN 1 523 IPR012416 GO:0005516
Tpr6g0343 525 MobiDBLite consensus disorder prediction 1 18 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr6g0343 Tpr-Chr6 2766260 2769141 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr6g0343 54 380 Calmodulin-binding Proteins AT5G26920 41.194 1.58e-75 243
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr6g0343 - - mtr:MTR_7g112000 622.854