Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr6g0342 ATGGAGAAAAAACGTTCCAAGGGAAGCTTCTTTAGCTTGTTTGATTGGAATGCCAAATCTCGTAAAAAGCTTGTTTGGAACAATCCAACCTCACAACCTGACGTTTCAAAGCAAGGAAAGGAAAATCTAGAGACCTTGCCAGAGTCACAATTCAATAGGATAAAGGTGGATGAGAATGGAGTAAGTCCGAGTAATATTGCAAGTGGTGATTTTCACTGCACCTTATCCGTCTGTAGTGATGAAGGGTGTGGCAGTAAAGCCCCTGGGTTAGTAGCAAGACTCATGGGTTTGGATTCTCTGCCAACTTCAGAAGTCGGTGAGCTTTCCGGTGCTTCATTATACAGCTCCAACTCTCATGGAGCTTCTCATTATAATGAGGGTTCTCTTCGTTCCATGGAGGACTTCCGTCGTGCGGACTACTTAAACACACCACTTAGGCCGGAGAAGTCTTCTTGGGATGCCATGGAATCAAGGGCACATAAAATGGAAAACCGGCAAATGAAGAGATTTCAAACTGAAATGTTGCCCCCAAAGTCGGCTAAACCCATTCCAGTTACTCACAATAGATTATTGTCTCCCATCAAGAGTAACGGTTATCTGCCTCAGAAGAATGTAGTTCAGATAATGGAGGCGGCTGCTAAGATAATTGATGGAAGTCCTCAGCCATATATGCGGAATAGAATACTATCAGGGGAGTCTTCATCTGTTCCCTTGAGAATTCTTGATTTGAAAGAGAGATTGGAAGCTGCACAATATGCACCCGTGTCTAGAAAGTTAGTCGATCCGAACAATGGCAACACATCAAATTGCAAGCCTGGTGAGAGGAGCTCTAATTTGTACAAAAGTACATCATCATTCAAGGGTTCAAGTTCAAGAGATTTTGAGAAACGTGGTTCTTGTCATTCATCAAGTAAAGGAAAATCAGGTTCTATGCAAACCAAAAACAATGTTCAAAGCAGAGATACATTGATTTCAAACGGAAATAGGAAATACATGAAGCAGAAAGAGCAGAATGAGACAAAGTCAAATCAGCTCACAAGGAGCCAGAAGTCAATTACAAACCGAGCATTACCGCAGAAAACGAGTGCAAACCGTAATAGCAATGTGCTGGTACAGAATAATCAGAAGCAAAATAGCATGACTTCCAAAGGTAAATCAGCTTCAAAAACAGATTTCAATAAGCCAACAACGCGAGGTTCATCTTCAGAAAATTCTAATGGAATCAGGAAGGCAACAAACAAGGGTGCTGCAAATGTCAATGTTCAGCCTAAAAGGTCAAGTTCTAGGGCAATCGATAACCGAAATGAGTTTCCCCCATCCAAAGCACATAGTATCTCCCAAAAGAAAAAGTATAACAGCAGAGGTGTTCATGAGGTAAGAAGTCCTGATCATGCAAGAAATGATTTCGAAAGCAAGTCCATAAAATGCAATTTTACAACTGATGGAAGTATTGATCAGAATGCTTTTAACATGAATGAAAGCAATGATGTTGTTTCATTTACATTTACATCTCCTTTGAGGAGAAGCATGCCTGAGTCTCTTGGACATAGTGATAATCTTCATCCCAAAAAATTATCACTGTCTCCGACACATATGATAGATAGTGATGCATTGAGTGTTCTGTTGGAGCAAAAGCTACAAGAATTGACATTGAGACTTAACTTACCTCAGTGTACCCTAGCCTCGGAGGAGCCTTATACTGGTTTGAGATCTAGTTTTCAAGACAAAGATGAGATGTTCAATGATGAACTTAATGGAATGCATAACTATCAATACGGTTCAAGTGATGGTCCAGTGCTTAACATGAATCAGCAACTGCAGATATCAGAAGTAAGGGAAGATCCTAACTGTAGCAACAACAATGAAAGTGGAAATGATCTAGGCTGTCAGTATTCCAACAATACTGATACAATTTTTCAAGCTCCTTCTATCAGTGAAAGTTACTTGGATAGTGAAGACAGTGCATATGGCAGCACAATTTATTCTTCCATGCAAGATGAAGAAGTGTCTAATATTTCCCAGATTAATGAATCTGAATCAGTTGAAAGTGAGGTGGCATTGTCAGAGCAAAGCTCTTCCGTATCTACGGGACACAATGTGGCTGTCACACAAATAATCAGAACACCAAACATGGTAGATTTGAAAAGATCAAGTAACATGGAACTTGAATATGTAAAGAACATACTTGGCAATGCAGAGTTTATGGCAGAAGAGTTCGTTTTGGGTCGGACTAATACCGTCATAATGCCAAATCTCTTTGATCTGTTGGAGAATCAGAGTACAGGAACAACATACTGTGGAGAAGAAGAGTACTCTAAGCTTGAAAGGAAGGTTATATTTGACTATGTGAGTGAGAGTCTAGAGTTGAGATGTGAAAAAGCTTTTCTTGGAACGTGTAAAACATGGCCTAGATGGGTGATATCAATTCAGAGGAAGGACATATTGGCAGAAGAATTGTACAAAGAGATGATGAGTTATAGGAACATGGAAGAGCTAATGGTGGATGAGCTTGTGCTGAATTACATGAGCAGTGGATATGGGAAATGGCTTGACTTTGACATTGAAACATTTGAAGAGGGGTTAGAGGTTGAAGAGGACATACTAGAATGTTTGATTGATGAATTTGTTTCTGATTTGTTGGTTGTTTAA 2649 0.3983 MEKKRSKGSFFSLFDWNAKSRKKLVWNNPTSQPDVSKQGKENLETLPESQFNRIKVDENGVSPSNIASGDFHCTLSVCSDEGCGSKAPGLVARLMGLDSLPTSEVGELSGASLYSSNSHGASHYNEGSLRSMEDFRRADYLNTPLRPEKSSWDAMESRAHKMENRQMKRFQTEMLPPKSAKPIPVTHNRLLSPIKSNGYLPQKNVVQIMEAAAKIIDGSPQPYMRNRILSGESSSVPLRILDLKERLEAAQYAPVSRKLVDPNNGNTSNCKPGERSSNLYKSTSSFKGSSSRDFEKRGSCHSSSKGKSGSMQTKNNVQSRDTLISNGNRKYMKQKEQNETKSNQLTRSQKSITNRALPQKTSANRNSNVLVQNNQKQNSMTSKGKSASKTDFNKPTTRGSSSENSNGIRKATNKGAANVNVQPKRSSSRAIDNRNEFPPSKAHSISQKKKYNSRGVHEVRSPDHARNDFESKSIKCNFTTDGSIDQNAFNMNESNDVVSFTFTSPLRRSMPESLGHSDNLHPKKLSLSPTHMIDSDALSVLLEQKLQELTLRLNLPQCTLASEEPYTGLRSSFQDKDEMFNDELNGMHNYQYGSSDGPVLNMNQQLQISEVREDPNCSNNNESGNDLGCQYSNNTDTIFQAPSISESYLDSEDSAYGSTIYSSMQDEEVSNISQINESESVESEVALSEQSSSVSTGHNVAVTQIIRTPNMVDLKRSSNMELEYVKNILGNAEFMAEEFVLGRTNTVIMPNLFDLLENQSTGTTYCGEEEYSKLERKVIFDYVSESLELRCEKAFLGTCKTWPRWVISIQRKDILAEELYKEMMSYRNMEELMVDELVLNYMSSGYGKWLDFDIETFEEGLEVEEDILECLIDEFVSDLLVV* 883
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr6g0342 882 MobiDBLite consensus disorder prediction 260 289 - -
Tpr6g0342 882 MobiDBLite consensus disorder prediction 303 331 - -
Tpr6g0342 882 MobiDBLite consensus disorder prediction 258 468 - -
Tpr6g0342 882 MobiDBLite consensus disorder prediction 338 446 - -
Tpr6g0342 882 Pfam Domain of unknown function (DUF4378) 721 874 IPR025486 -
Tpr6g0342 882 PANTHER PHOSPHATIDYLINOSITOL N-ACETYLGLUCOSAMINYLTRANSFERASE SUBUNIT P DOWN SYNDROME CRITICAL REGION PROTEIN 5 -RELATED 1 882 - -
Tpr6g0342 882 PANTHER DUF4378 DOMAIN PROTEIN 1 882 - -
Tpr6g0342 882 MobiDBLite consensus disorder prediction 451 468 - -
Tpr6g0342 882 Pfam DUF761-associated sequence motif 76 104 IPR032795 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr6g0342 Tpr-Chr6 2752596 2757793 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr6g0342 1 880 TRM (TON1 Recruiting Motif) Superfamily AT5G26910 32.709 1.40e-105 344
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr6g0342 - - gmx:102663635 1064.68