Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr6g0340 ATGTCTAACAATGTCGCTGGAGTTGACAACACATTCAGAAGAAAATTTGATCCTGAAGAGTATCGTGAACTTGCTCGGGAGCGTGAGAGGAAGGAAGAACCTAAAGGTCATGTGCAGAGGAAACCCTTGAAACATAGGGATTATGAAGTAAACCTTACATCTTCCTTAGGAAAGACTCAGGTTGTGACGCCGGTTGCACCACTAAGCCAACAGGCTGGATATTACTGCCGAGTTTGTGAGTGTGTGGTGAAGGACTCTGCAAACTACTTGGATCATATTAATGGAAAAAAACATCAAAGAATGCTGGGCATGTCTATGCGAGCTGAACGTTCTTCTCTCAAACAGGTTCAGGAACGTTTTCAAGTTCTTAAGAAACGTAAAGACATTGGAGCCTTTACAGAGAAAGATTTTGATGACAGGGTCTTAAAACACCAAGAAGAAGAGGAAGAAAGAAAGCGACTGCGTCGGGAAAAGAAAAAAGAAAAGAAGAAGGAAGCTGTAGAAGAACCTGAAATGGATCCTGATGTTGCTGCCTTGATGGGGTTTGGTGGTTTCCGCTCATCTAACAAAAAGTGA 576 0.4253 MSNNVAGVDNTFRRKFDPEEYRELARERERKEEPKGHVQRKPLKHRDYEVNLTSSLGKTQVVTPVAPLSQQAGYYCRVCECVVKDSANYLDHINGKKHQRMLGMSMRAERSSLKQVQERFQVLKKRKDIGAFTEKDFDDRVLKHQEEEEERKRLRREKKKEKKKEAVEEPEMDPDVAALMGFGGFRSSNKK* 192
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr6g0340 191 MobiDBLite consensus disorder prediction 144 171 - -
Tpr6g0340 191 Coils Coil 106 126 - -
Tpr6g0340 191 MobiDBLite consensus disorder prediction 144 191 - -
Tpr6g0340 191 Gene3D Classic Zinc Finger 68 107 - -
Tpr6g0340 191 PANTHER ZINC FINGER MATRIN-TYPE PROTEIN 2 1 190 IPR040107 GO:0000398|GO:0005681
Tpr6g0340 191 Coils Coil 142 169 - -
Tpr6g0340 191 SMART ZnF_U1_5 71 105 IPR003604 GO:0003676|GO:0008270
Tpr6g0340 191 Pfam Zinc-finger of C2H2 type 74 98 - -
Tpr6g0340 191 SUPERFAMILY beta-beta-alpha zinc fingers 69 113 IPR036236 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr6g0340 2 136 C2H2 Transcription Factor Family AT3G05760 73.944 1.12e-72 214
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr6g0340 K12848 - gmx:100795833 281.567
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr6g0340 6 2744189 2748145 Tpr6g0340 6 2744189 2748145 ECH