Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr6g0336 ATGGTTTGCCAAGAAGAGGTATTGATTGAAAAAGTTTTAAATTTGTATAAACAAATTTCAAGTCTTGAATCTCTCAAACCTAGCAAAAATGTCGACATGCTTTTCACCGATCTTGTCCTCACATGCATGCCACCTAGTCCTATAGATGTCATAACCCTCCCAAAAACATTGCAAGAAAAAAGATCCCATCTTATAAGGCTATGTGGTGAAGCTGAAGGGTATTTGGAGAGACACTACTCAGCCATATTAGGCTCATATCAAAACCCTCTTGACCATCTCCATATTTTCCCTTACTATTCTAACTACATCAAACTTGGTCACCTTGAGTTTTCACTCCTTAGCCAACACTGCACTCATGTCCCTAGTAAAATTGCTTTTATTGGTTCTGGACCCCTTCCCCTTACTTCAATTGTTTTGGCATCAAATCACTTGCCTTCAACCACTTTTCACAATTATGACATCGACCCTTTAGCCAATTCAAGTGCTATGCACCTGGTTTCATCTGATCCTGACTTGTCAAACCGAATGGTTTTTCACACCAGTGACATATTGGATGTGTCAAACGATTTGAAAGACTATGAAATTGTTTACTTGGCTGCCCTTGTAGGTATGGACAAGGAGGAAAAGAATCGAATCATCGATCATTTAGGGAAGCACATGGCTCCAGGAGCACTTCTTATGCTAAGGAGTGCTCATGGGGCTCGTGCTTTTCTGTATCCGGTGGTTGAACCTTCTGATCTTCGAGGCTTTGAAGTCCTCTCTGTGTTCCATCCTATGGACGAGGTTATCAATTCAGTTGTCATATCGCGTAAGTATCCTATGCCTAAACACTCAATTGATCAAGGTCTTGGTTCCATGATCCTACCAAACAAGTGTTCTGAGATTCAAGTCATTAACCCCCTTAGGGGCCTCAACCATGGGAATATGATTGAGGAATTGACCATTGAGGATCAACTCTTGTAA 963 0.4112 MVCQEEVLIEKVLNLYKQISSLESLKPSKNVDMLFTDLVLTCMPPSPIDVITLPKTLQEKRSHLIRLCGEAEGYLERHYSAILGSYQNPLDHLHIFPYYSNYIKLGHLEFSLLSQHCTHVPSKIAFIGSGPLPLTSIVLASNHLPSTTFHNYDIDPLANSSAMHLVSSDPDLSNRMVFHTSDILDVSNDLKDYEIVYLAALVGMDKEEKNRIIDHLGKHMAPGALLMLRSAHGARAFLYPVVEPSDLRGFEVLSVFHPMDEVINSVVISRKYPMPKHSIDQGLGSMILPNKCSEIQVINPLRGLNHGNMIEELTIEDQLL* 321
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr6g0336 320 ProSiteProfiles Nicotianamine synthase (NAS)-like family profile. 1 276 IPR004298 GO:0030410|GO:0030418
Tpr6g0336 320 Pfam Nicotianamine synthase protein 5 273 IPR004298 GO:0030410|GO:0030418
Tpr6g0336 320 PANTHER SYNTHASE, PUTATIVE-RELATED 1 319 - -
Tpr6g0336 320 Gene3D Vaccinia Virus protein VP39 5 273 IPR029063 -
Tpr6g0336 320 PANTHER NICOTIANAMINE SYNTHASE 3 1 319 IPR004298 GO:0030410|GO:0030418
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr6g0336 Tpr-Chr6 2722622 2723870 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr6g0336 1 314 Nicotianamine Synthase Gene Family AT5G04950 60.188 8.05e-140 396
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr6g0336 K05953 - gmx:100803630 523.857