Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr6g0333 ATGAGAAATGTGGTTCTTGTCATTCAACAAGAAAAATCATTCTGTGCAAGCCAAAAACAATGTTCAAAGCAGAGATATATTGGTTTCAAATGGAAAGAAGAAATATATGAAGCAGAAAGAACAGAATGTGACAAAGTCAAACCAGCTCACAAGGAGCCAGCAACCGAACATTACCGCAGAAAACGAGTGCATACCGTAATGGCAATGTGCTGGAAGGCAACGAACAAGGGTGCTACAAATGTCATTGTTCAGCCTAAAAGGTCAAGTTATAGGGCAACTGATAACCGAAATGAGTTCCCCGCCATCCAAAGCACACCGTATTTCCCGAAAGAAAAGTATAACAGTAGAGGTGCTCATGAGGTAAGAAGCCCCGATCTTGCAAGAAATGGTTCCGAAAGCAAGTCCATAAAATCCAATTTTACAACTGATGGAAGTATTGATCAGAATGCTTTTAACATGAATGAAAGTAATGATGTTGTTTCATTTACATTTCCATCTCCTTTGAGAAGCATGCCTGAGTCTCTTGGACATAGTGATAATCTTCATCCCAAAAGATTATCAATATCTCTGACGCATATGATAGATAGTGATGCATTGAGTGTTCTGTTGGAGCAAAAGCTACAAGAATTGACATCGAGACTTAACTTACCTCAGTGTACCCTAGCCTCGGATGAGCCTTATACTGGTTTGAGATCTAGTTCTCAAGACAAAGCATTCAGTATGGTAAACACCACATTCCGTATGGTAAGCATTCATTACAATGTTTGTATTTTTGCATATGGCCAAGCAGAATCAGGAAAAACGTACACTGTGGCAGGACCAGACAATCTTGATGACGACACCATAGGTGTGAACTACCGTGCATTGCAAGATCTCTTCTTTCTCTCAGATCAGAGGAAAGACACCATTAACTATGTAATCTCAGTTCAGATGCTTGAGATTTACAATGAGCAAGTCAGAGACCTACTAGCTCAAGAGAGAGGTATTAATTTTCCTTTGCTAACACACATTGACCTTTCTTGTAACTGTTGGTACGTATATAATTGCAGTTGCTTGACAGTTCATGTTAGTGGAAAGAACTTGGTATCAGGAGGCATTATTCGAGGTAGCATGCATCTTGTTGATCTTGCAGGAAGTGAGAGAGCCGATAAAACTGAGGCCACGGGAGTTAGAATTAAAGAGGCTCAACATATCAACAAGTCACTTTCTGCCTTAGGGGATGTAATCGCTTCCCTTGCGCGGAAGAATGCACATTTTCCATACTGGAACACCAAACTTACTCAGCTACTTCAGGATGCACTTGGTATGATTTTCCAACGTAATCGTATGCATTGTCGCCTCCCATACAACAACGTAGCTCGTAAGATTTTATGTGATTTAAAATATTTTTATAAAAGATTTTTTCATTCAGATTCTTAA 1419 0.3961 MRNVVLVIQQEKSFCASQKQCSKQRYIGFKWKEEIYEAERTECDKVKPAHKEPATEHYRRKRVHTVMAMCWKATNKGATNVIVQPKRSSYRATDNRNEFPAIQSTPYFPKEKYNSRGAHEVRSPDLARNGSESKSIKSNFTTDGSIDQNAFNMNESNDVVSFTFPSPLRSMPESLGHSDNLHPKRLSISLTHMIDSDALSVLLEQKLQELTSRLNLPQCTLASDEPYTGLRSSSQDKAFSMVNTTFRMVSIHYNVCIFAYGQAESGKTYTVAGPDNLDDDTIGVNYRALQDLFFLSDQRKDTINYVISVQMLEIYNEQVRDLLAQERGINFPLLTHIDLSCNCWYVYNCSCLTVHVSGKNLVSGGIIRGSMHLVDLAGSERADKTEATGVRIKEAQHINKSLSALGDVIASLARKNAHFPYWNTKLTQLLQDALGMIFQRNRMHCRLPYNNVARKILCDLKYFYKRFFHSDS* 473
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr6g0333 472 MobiDBLite consensus disorder prediction 113 127 - -
Tpr6g0333 472 Pfam Kinesin motor domain 352 435 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Tpr6g0333 472 Pfam Kinesin motor domain 242 327 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Tpr6g0333 472 PRINTS Kinesin heavy chain signature 252 273 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Tpr6g0333 472 PRINTS Kinesin heavy chain signature 370 388 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Tpr6g0333 472 PRINTS Kinesin heavy chain signature 419 440 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Tpr6g0333 472 MobiDBLite consensus disorder prediction 113 133 - -
Tpr6g0333 472 PANTHER KINESIN-LIKE PROTEIN KIN-14H 232 333 - -
Tpr6g0333 472 PANTHER KINESIN-LIKE PROTEIN KIN-14H 350 435 - -
Tpr6g0333 472 SMART kinesin_4 196 464 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Tpr6g0333 472 Gene3D Kinesin motor domain 211 338 IPR036961 -
Tpr6g0333 472 PANTHER KINESIN-LIKE PROTEIN KLP-3 350 435 - -
Tpr6g0333 472 PANTHER KINESIN-LIKE PROTEIN KLP-3 232 333 - -
Tpr6g0333 472 Gene3D Kinesin motor domain 347 451 IPR036961 -
Tpr6g0333 472 ProSiteProfiles Kinesin motor domain profile. 253 435 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Tpr6g0333 472 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 233 435 IPR027417 -
Tpr6g0333 472 ProSitePatterns Kinesin motor domain signature. 369 380 IPR019821 GO:0003777|GO:0005524|GO:0007018
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr6g0333 Tpr-Chr6 2704609 2707323 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr6g0333 233 435 Calmodulin-binding Proteins AT5G65930 35.000 2.21e-31 126
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr6g0333 K10406 - gmx:100816952 258.84
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr6g0333 6 2704609 2707323 Tpr1g1388 1 12701290 12705616 PCT