Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr6g0329 ATGATGAATATACTTTGTCCAAGTGTTCACAATTCTGAAAAACTCTCTCAGAGTGTGAAAAAATTGACCGACTATGATGATGATCTCTACAAGTTCTACTATATTGCAGAGTCTCAAATCGCTGCAAACTCAAATGGTTGCAACGTGGATTCGCAAATGAGAAAGAAGGTTATTGATTGGTTGATACAAAAACACTATGAACAAAAGCTCAATTCAGAAACCCTTTATCTTTCTATCAACATTCTTGATCGATTCCTTTCTAAAACCGAATTTGAAGTCACAACACAGAGCAACTTTGAACTCATCGGTGTTACAGCGCTGTTGTTGGCGTCTAAGTATGAACAAAAAAGCGCAGTTGGAGTTTACGACGTCGAATACATGGCAGATTATGCTTTTACTCCGGATGAAATTTGTGAAATGGAGAAAATTATCCTGAAAAAGCTTAATTGGGTTTTATCGGTTCCAACTACTTATGTGTTTCTTGTTAGAAACATCAGATCATGTCTCTTGCCTGATGAAGATAGAAGAATCATGGAGAATTTGGCATCTTTCTTCTCGGAGTTAAGCTTAACACAACATTCCATTATGTGTGACTACAAGCCTTCGATGATTGCTGCTTCTGCAATGTATTGTGCGAGAGTTGTTGTTGGAATTTACCCGTTTTGGAACAATGATCTGAAGATTTCTGCAGGATATTCAGAACAGATGCTATGGCCTTGTGTTAAGGCTATGATGGAACTGTGTAATGACATTTGTAGAGACGGAACCATGGAAGTTTTCAAGAAGTTTTCTAGTCTACGTCAATCTAGGGTTTCGTGTTTGGCTCAAGAAATTATTGAGAAAGCTCTTTTATCTTAG 858 0.3741 MMNILCPSVHNSEKLSQSVKKLTDYDDDLYKFYYIAESQIAANSNGCNVDSQMRKKVIDWLIQKHYEQKLNSETLYLSINILDRFLSKTEFEVTTQSNFELIGVTALLLASKYEQKSAVGVYDVEYMADYAFTPDEICEMEKIILKKLNWVLSVPTTYVFLVRNIRSCLLPDEDRRIMENLASFFSELSLTQHSIMCDYKPSMIAASAMYCARVVVGIYPFWNNDLKISAGYSEQMLWPCVKAMMELCNDICRDGTMEVFKKFSSLRQSRVSCLAQEIIEKALLS* 286
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr6g0329 285 SMART cyclin_7 159 246 IPR013763 -
Tpr6g0329 285 SMART cyclin_7 59 146 IPR013763 -
Tpr6g0329 285 Pfam Cyclin, N-terminal domain 48 152 IPR006671 -
Tpr6g0329 285 Gene3D - 148 283 - -
Tpr6g0329 285 Pfam Cyclin, C-terminal domain 155 274 IPR004367 -
Tpr6g0329 285 PANTHER CYCLIN-B1-4 19 277 - -
Tpr6g0329 285 SMART Cyclin_C_2 155 277 IPR004367 -
Tpr6g0329 285 ProSitePatterns Cyclins signature. 54 85 IPR006671 -
Tpr6g0329 285 SUPERFAMILY Cyclin-like 22 151 IPR036915 -
Tpr6g0329 285 SUPERFAMILY Cyclin-like 154 274 IPR036915 -
Tpr6g0329 285 CDD CYCLIN 153 245 IPR013763 -
Tpr6g0329 285 Gene3D - 42 147 - -
Tpr6g0329 285 CDD CYCLIN 53 145 IPR013763 -
Tpr6g0329 285 PIRSF Cyclin_A_B_D_E 7 284 IPR039361 -
Tpr6g0329 285 PANTHER CYCLINS 19 277 IPR039361 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr6g0329 Tpr-Chr6 2671823 2672900 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr6g0329 24 274 Core Cell Cycle Gene Families AT2G26760 36.220 3.48e-48 163
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr6g0329 K21777 - zju:107410303 189.119