Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr6g0328 ATGGATCGAGATGGAGGTGGATCCAACGGTGATGGATCTTCTTATTACTCTGTTCTTGGTATTCGCAGTGACGCCTCCTCCTCTGATATTCGCACTGCTTACCGCAAACTCGCTATGAGATGGCACCCTGATAAATTCGCTCGGAACCCTAACACTGCCGGAGAAGCCAAACGACGGTTTCAGCAAATCCAAGAAGCATACTCAGTTCTCTCTGATGAGTCTAAGAGATCAATGTACGATGCTGGGTTCTACGATCCTCTTGAAGAAGAAGATCAAGAATTTTGTGATTTTATGAGCGAAATGATCTCAATGATGAACAATGTCAAAGATGAGGGGGATAGTTTGGAGGATCTACAGAGGATGTTTGTTGAGATGGTAGGTGGAGATGGCATGAGCTTTGAATTGAACCAGGATCAGACGGCTGGGAAGAGAGGACGCACTACTAGTAGTGGATCAAGAGGCAACAATGCCAAGCGCAGCAATCATTGCCGCTAG 495 0.4626 MDRDGGGSNGDGSSYYSVLGIRSDASSSDIRTAYRKLAMRWHPDKFARNPNTAGEAKRRFQQIQEAYSVLSDESKRSMYDAGFYDPLEEEDQEFCDFMSEMISMMNNVKDEGDSLEDLQRMFVEMVGGDGMSFELNQDQTAGKRGRTTSSGSRGNNAKRSNHCR* 165
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr6g0328 164 ProSitePatterns Nt-dnaJ domain signature. 60 79 IPR018253 -
Tpr6g0328 164 Pfam DnaJ domain 15 80 IPR001623 -
Tpr6g0328 164 ProSiteProfiles dnaJ domain profile. 14 83 IPR001623 -
Tpr6g0328 164 PANTHER PUTATIVE, EXPRESSED-RELATED 13 149 - -
Tpr6g0328 164 MobiDBLite consensus disorder prediction 133 158 - -
Tpr6g0328 164 Gene3D DnaJ domain 6 104 IPR036869 -
Tpr6g0328 164 PANTHER PUTATIVE, EXPRESSED-RELATED 13 149 - -
Tpr6g0328 164 SMART dnaj_3 13 75 IPR001623 -
Tpr6g0328 164 CDD DnaJ 15 72 IPR001623 -
Tpr6g0328 164 PRINTS DnaJ domain signature 16 34 IPR001623 -
Tpr6g0328 164 PRINTS DnaJ domain signature 34 49 IPR001623 -
Tpr6g0328 164 PRINTS DnaJ domain signature 55 75 IPR001623 -
Tpr6g0328 164 SUPERFAMILY Chaperone J-domain 14 86 IPR036869 -
Tpr6g0328 164 MobiDBLite consensus disorder prediction 133 164 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr6g0328 Tpr-Chr6 2667999 2669946 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr6g0328 5 81 C2H2 Transcription Factor Family AT1G74250 38.462 6.97e-13 63.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr6g0328 - - mtr:MTR_7g112360 291.197