Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr6g0322 ATGTCAAACGACCAAGCTTTACCATTCTCTGTTGTTTCTGTCTTCGAAGATGTTATTCAACAACAACAACAACAAGAAGAACAACAACAGCAGCAGCAACAACAGCAACAACAACAACAACAACAACAACAACAACAACAACAACTGCAACAACAACAGGCTCCCCGGTCCAGTGATTTCAAATTTGTCTCCAGAAAAACCGAAGAAGCTTCTTTGTTAAGGTATGAAGCGGCCTGTTGGTTGCGAAAAACGGTTGGAGTTGTTGGAGGGAAGGACTTACCAGCTGAACCTTCTGAAGAAGACTTTAGGATTGGTTTGCGTAGCGGGATTATTCTCTGCAATGCTCTCAACAAAGTTCAACCTGGAGCAGTGGCTAAGGTGGTTGGAGGCCCTTGTGATTCTGTTCTTGTTCCTGATGGAGCAGCATTATCTGCTTTTCAATACTTTGAAAATGTAAGGAATTTTCTTGTAGCTGTAGAAGAAATGGGACTTCCTTCCTTTGAAGCTTCTGATTTGGAACAGGGAGGAAAATCTTCAAGAATAGTGAATTGTGTTTTGGCAATGAAATCCTTGTCTGAAGGGACACTTGGAGGAAGAAGTGGGTCAGGGTCATTCAAATTTGGTCAAAAGCCACCTACACCTGTGAAATCAATTTTGAGGAAAAACTCAGAACCATTCACGAAGTCACTATGGAGTATGACATTAGGTGACAAAGATGTTGGTTACATGAGTGATAACTCTTCATACAATGATTCTGGAAACGATCGCCAAGAAGGGGGTTCATTTTCTTCCTTAAATTCACTAGTTCGCCAATATTTGTCTAATAAGAGGCCAGACGAAATTCCCATTGCAGTGGAGTCTCTTCTTAGCAAAGTCATGGAAGAGTTTGAGCGTCGAATGCAAATTCAACAAGAAACGTTTAAAACAACTCAAGAAGATAAGCCATCGGCTGAACCGGAACAATCAATTTCAAAAGATGCTTCTGTTGATGAAGGGATGGAAGAAAATGAAGATGGAGAACAGTTGCAAGAAAAGATCGAAGAAAATGAAGATGAAGAACAGTTGCAAGACAAGATGGAAGAAAATGAAGATGGAGAACAGTTGCAAGAAAAACAAGAGGAATGCGATGATGAGAAATACAATAGTGATGCTGAAGAATTAAACAGGCTGAAATTGAAGCAGCTAAGTATAGTCGAGGAACAAACTAGAAGTGTCCAGGAAGTGAAACACATTGTACATCAAACGAAATCGGGAATGCAGTTTCTGAAAAGGGAATACCAAAAGGATATGATCAATCTAAGTAAGCACCTGCAAAGTCTAGCTGCTGCTGCTCAAGGATATCATAAAGTTCTCGAAGAAAACCGCAAGTTATACAATCAAGTGCAGGATCTTAAAGGAAACATTAGGGTGTACTGTCGAGTTCGACCGTTCTTGGGAGCGAAAACAAGTCAAAATAGCGTTGTAAGCGGTGTGGAGGAAGGAAGTATGACACTCATGATACCTCCCAATTCCAAACTTGGTAAAGAAGGAAAGAAGACATTTACCTTCAATAAAGCTTTTGGTTCTACTTCAACACAAGCGGAAGTATTCTCGGATATGCAGCCTCTGGTCCGTTCGGTTCTTGATGGTTACAATGTTTGCATTTTTGCATATGGCCAAACAGGATCAGGAAAAACGTATACTATGGCAGGACCAGACAATCTTGATGACGACACCATAGGTGTGAACTACCGTGCATTGCAAGATCTCTTCTTTCTCTCAGATCAGAGGAAAGACACCATTAACTATGTAATCTCAGTTCAGATGCTTGAGATTTACAACGAGCAAGTCAGAGACCTACTAGCTCCAGAGGGTTCTAATAAAAGATTAGATATCCGCAATAGTTCCAATAATGGCATCAACGTGCCAGATGCGAACCTTGTTCCAGTTTCAACCACTTCCGATGTCATAAATTTGATGAACTTGGGACATAAAAATCGCGCTGTTGGTTCTACTTCCATGAACGAACGTAGCAGTCGTTCTCACAGTTGCTTGACAGTTCATGTTCATGGAAAGAACTTGATATCAGGAGGCATTATTCGAGGTAGTATGCATCTTGTTGACCTTGCAGGAAGTGAGAGGGCCGATAAAACCGAGGCCACGGGAGATAGACTTAAAGAGGCTCAACATATCAACAAGTCACTTTCTGCCTTAGGGGATGTAATCGCTTCCCTTGCGCAGAAGAATGCACATGTTCCATACCGGAACAGTAAACTTACTCAGCTACTTCAGGATGCACTTGGAGGGCAGGCCAAGACTCTCATGTTTGTTCATATTAGTCCGGAACCTGATGCTCTTGGAGAAACACTAAGTACACTCAAGTTCGCAGAACGCGTATCCACTGTTGAACTAGGAGCTGCAAAAGTAAATAAAGATAACACAGAAGTGAAAGACCTTAAAGAACAGATTGCTAGTCTGAAGGCAGCCTTAGCGAGGAAGGATGGAGAAGCAGAACAGTTTCAACAACCTACCAATAATGGCAATGTAACACCAAAGTTAAAATCGTATGCATCGTCACCTCCCATACAACAACGTAGCTCGACATCTGCTGGAGGCCGTAAGCAGCCAAAGGATGATACTAGTAGCGAAATGGGTGAGAATAAGGGTGCAACAAAGCTGAAAAGAAGAAGCCTAGATCTTCATGACATGATGTATAGGGGTTCACCACCATGGCCACAAAACAACCAAGGAGTAAATGGAAAAGAGGATGATAAGGAATCAGTTTCAAGTAGGATGAACAGGAATGACAGCTTCACAAGTGATGATAGCTTAGTGGGACAATGGGAATCAGAAAGTAAATACTCTCCGATGTTAAGTCCAAGTTCTCTTTCAGAAAATTCAAAGTTATGTTCGGATCCCGGGTATGAGATGACTACTATGACCACAGATGAATCTGAGGAGCTTGAAATTGCAACATGTAGCGATTCTTCAGAATCAGACATGAGTTGGTTAATACAGGCACCTAAACCAACCGCAATTTCAAATGGATTAGGCTCTAAATTAAAGAAACCTACTAATCCTAGACCAACAAAGATCCCCGAAGTCAGGAGTATGATCCCATCATTAATTCCTACTCCATCAAAAAAACCAGCAAGCCCAGTTACTCAAGCAAGAAAGAATCCAGGATCAACTGGTTTAAAAAGGAGGAGTGGACATGCAAAGTGA 3204 0.4154 MSNDQALPFSVVSVFEDVIQQQQQQEEQQQQQQQQQQQQQQQQQQQQQLQQQQAPRSSDFKFVSRKTEEASLLRYEAACWLRKTVGVVGGKDLPAEPSEEDFRIGLRSGIILCNALNKVQPGAVAKVVGGPCDSVLVPDGAALSAFQYFENVRNFLVAVEEMGLPSFEASDLEQGGKSSRIVNCVLAMKSLSEGTLGGRSGSGSFKFGQKPPTPVKSILRKNSEPFTKSLWSMTLGDKDVGYMSDNSSYNDSGNDRQEGGSFSSLNSLVRQYLSNKRPDEIPIAVESLLSKVMEEFERRMQIQQETFKTTQEDKPSAEPEQSISKDASVDEGMEENEDGEQLQEKIEENEDEEQLQDKMEENEDGEQLQEKQEECDDEKYNSDAEELNRLKLKQLSIVEEQTRSVQEVKHIVHQTKSGMQFLKREYQKDMINLSKHLQSLAAAAQGYHKVLEENRKLYNQVQDLKGNIRVYCRVRPFLGAKTSQNSVVSGVEEGSMTLMIPPNSKLGKEGKKTFTFNKAFGSTSTQAEVFSDMQPLVRSVLDGYNVCIFAYGQTGSGKTYTMAGPDNLDDDTIGVNYRALQDLFFLSDQRKDTINYVISVQMLEIYNEQVRDLLAPEGSNKRLDIRNSSNNGINVPDANLVPVSTTSDVINLMNLGHKNRAVGSTSMNERSSRSHSCLTVHVHGKNLISGGIIRGSMHLVDLAGSERADKTEATGDRLKEAQHINKSLSALGDVIASLAQKNAHVPYRNSKLTQLLQDALGGQAKTLMFVHISPEPDALGETLSTLKFAERVSTVELGAAKVNKDNTEVKDLKEQIASLKAALARKDGEAEQFQQPTNNGNVTPKLKSYASSPPIQQRSSTSAGGRKQPKDDTSSEMGENKGATKLKRRSLDLHDMMYRGSPPWPQNNQGVNGKEDDKESVSSRMNRNDSFTSDDSLVGQWESESKYSPMLSPSSLSENSKLCSDPGYEMTTMTTDESEELEIATCSDSSESDMSWLIQAPKPTAISNGLGSKLKKPTNPRPTKIPEVRSMIPSLIPTPSKKPASPVTQARKNPGSTGLKRRSGHAK* 1068
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr6g0322 1067 Pfam Calponin homology (CH) domain 75 189 IPR001715 GO:0005515
Tpr6g0322 1067 Coils Coil 447 467 - -
Tpr6g0322 1067 Pfam Kinesin motor domain 473 794 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Tpr6g0322 1067 SMART ch_5 73 191 IPR001715 GO:0005515
Tpr6g0322 1067 SMART kinesin_4 465 803 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Tpr6g0322 1067 CDD KISc_C_terminal 465 797 - -
Tpr6g0322 1067 MobiDBLite consensus disorder prediction 925 980 - -
Tpr6g0322 1067 MobiDBLite consensus disorder prediction 311 330 - -
Tpr6g0322 1067 Gene3D - 64 194 IPR036872 -
Tpr6g0322 1067 MobiDBLite consensus disorder prediction 869 889 - -
Tpr6g0322 1067 MobiDBLite consensus disorder prediction 1041 1056 - -
Tpr6g0322 1067 MobiDBLite consensus disorder prediction 25 60 - -
Tpr6g0322 1067 PANTHER KINESIN-LIKE PROTEIN KIN-14H 58 1051 - -
Tpr6g0322 1067 Coils Coil 332 362 - -
Tpr6g0322 1067 MobiDBLite consensus disorder prediction 831 868 - -
Tpr6g0322 1067 MobiDBLite consensus disorder prediction 827 889 - -
Tpr6g0322 1067 PRINTS Kinesin heavy chain signature 543 564 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Tpr6g0322 1067 PRINTS Kinesin heavy chain signature 665 682 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Tpr6g0322 1067 PRINTS Kinesin heavy chain signature 696 714 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Tpr6g0322 1067 PRINTS Kinesin heavy chain signature 745 766 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Tpr6g0322 1067 PANTHER KINESIN-LIKE PROTEIN KLP-3 58 1051 - -
Tpr6g0322 1067 MobiDBLite consensus disorder prediction 987 1014 - -
Tpr6g0322 1067 ProSitePatterns Kinesin motor domain signature. 695 706 IPR019821 GO:0003777|GO:0005524|GO:0007018
Tpr6g0322 1067 MobiDBLite consensus disorder prediction 306 381 - -
Tpr6g0322 1067 MobiDBLite consensus disorder prediction 331 360 - -
Tpr6g0322 1067 Coils Coil 12 52 - -
Tpr6g0322 1067 ProSiteProfiles Kinesin motor domain profile. 467 795 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Tpr6g0322 1067 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 467 831 IPR027417 -
Tpr6g0322 1067 Gene3D Kinesin motor domain 408 797 IPR036961 -
Tpr6g0322 1067 Coils Coil 802 829 - -
Tpr6g0322 1067 Coils Coil 293 313 - -
Tpr6g0322 1067 SUPERFAMILY Calponin-homology domain, CH-domain 74 191 IPR036872 -
Tpr6g0322 1067 MobiDBLite consensus disorder prediction 901 1067 - -
Tpr6g0322 1067 ProSiteProfiles Calponin homology (CH) domain profile. 71 193 IPR001715 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr6g0322 Tpr-Chr6 2608727 2615358 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr6g0322 455 831 Calmodulin-binding Proteins AT5G65930 40.000 1.21e-75 271
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr6g0322 K10406 - gmx:100799535 1323.53
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr6g0322 6 2608727 2615358 Tpr6g0322 6 2608727 2615358 ECH