Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr6g0321 ATGAGTAAGCGTGAATTTTCAAGGATGAAGCCGTTATCATCACAAGTTCCTTTGGCTACTTTGATTGGCCGTGAGATTCGAAATGAGAATGTTGAAAAACCTTTTGTCAAATATGGACAAGCTGGATTGGCAAAAAAAGGAGAAGATTACTTTTTTATTAAAACTGATTGTTACAGGGTTCCCTCTGATCCATCAACTGCGTTTTCCGTCTTCGCGATTTTTGACGGGCACAACGGTATATCAGCTGCTATTTATACAAAGGAAAACTTGCTTAATAATGTTTTGAGTGCAATGCCACAAGATATCAGCAGGGATGCATGGCTACAGGCCCTTCCTCGCGCTTTAGTTGTTGGTTTTGTGAAAACTGACACAGAGTTTCAGAAGAAGGGGGAAACTTCTGGAACAACAGCTACATTTGTTCTGGTTGATGGATGGACTGTCACTGTTGCATCTGTTGGTGATTCCCGTTGCATATTAGATACTCAGGGAGGTGTAGTTTCTCTCCTGACAGTTGACCATAGATTGGAAGAGAATGTAGAAGAGAGGGAGCGTGTTACTGCCAGTGGTGGTGAAGTAGGAAGACTCAATATATTTGGGGGAAATGCGGTAGGGCCTCTTCGCTGCTGGCCTGGTGGATTGTGCCTATCTAGATCAATAGGAGACACGGATGTCGGAGAATATATTGTGCCAATACCACATGTTAAGCAAGTGAAACTTTCAAATGCTGGTGGAAGGCTTATTATAGCCTCTGATGGTATTTGGGATGCTTTATCTAATGATACGGCTGCCATGTCATGTCGGGGTCTACCTGCAGAGCTTGCTGCTAAGCTAGTGGTTAAGGAAGCTCTTAGATCTAGAGGCCTGAAGGATGATACAACCTGCCTTGTTGTAGATATTATTCCTTCTGACCACTCTGTATTACCACCAACTCCAAGAAAGAAAAATAATATGCTAACCACGCTTCTCTTTAGAAAGAAATCTGAGAACTCTACAAACAAAGCTACTAGCAAGCTTTCTGCAGTTGGTGTTGTTGAGGAGTTATTTGAAGAGGGTTCTGCAATGCTTATAGAAAGGCTTGGTAAGGATTTTCCATTTGATAAGAATTCTGAGATATTCCGCTGTGCGATTTGCCAAGTGGATCAACCCCCTGGCAATGGTTTATCAGTGAACTCTGGACCTTTCTTTTCTCCAGCTTCTAAGCCATGGGAAGGCCCATTTCTCTGCACAAATTGTCGGAAGAAAAAAGATGCCATGGAAGGAAAGAGGCCTAGCTCACCTACCGTTACAGCACAATAA 1296 0.4282 MSKREFSRMKPLSSQVPLATLIGREIRNENVEKPFVKYGQAGLAKKGEDYFFIKTDCYRVPSDPSTAFSVFAIFDGHNGISAAIYTKENLLNNVLSAMPQDISRDAWLQALPRALVVGFVKTDTEFQKKGETSGTTATFVLVDGWTVTVASVGDSRCILDTQGGVVSLLTVDHRLEENVEERERVTASGGEVGRLNIFGGNAVGPLRCWPGGLCLSRSIGDTDVGEYIVPIPHVKQVKLSNAGGRLIIASDGIWDALSNDTAAMSCRGLPAELAAKLVVKEALRSRGLKDDTTCLVVDIIPSDHSVLPPTPRKKNNMLTTLLFRKKSENSTNKATSKLSAVGVVEELFEEGSAMLIERLGKDFPFDKNSEIFRCAICQVDQPPGNGLSVNSGPFFSPASKPWEGPFLCTNCRKKKDAMEGKRPSSPTVTAQ* 432
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr6g0321 431 PANTHER ALPHABET, ISOFORM E-RELATED 2 429 - -
Tpr6g0321 431 PANTHER PROTEIN PHOSPHATASE 2C 5-RELATED 2 429 - -
Tpr6g0321 431 CDD PP2Cc 45 299 IPR001932 -
Tpr6g0321 431 Pfam Protein phosphatase 2C 64 268 IPR001932 -
Tpr6g0321 431 Gene3D - 35 304 IPR036457 -
Tpr6g0321 431 SUPERFAMILY PP2C-like 39 299 IPR036457 -
Tpr6g0321 431 SMART PP2C_4 25 297 IPR001932 -
Tpr6g0321 431 ProSiteProfiles PPM-type phosphatase domain profile. 34 299 IPR001932 -
Tpr6g0321 431 SMART PP2C_SIG_2 53 299 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr6g0321 Tpr-Chr6 2603878 2607007 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr6g0321 1 429 PP2C-type Phosphatase Gene Family AT1G09160 75.524 0.0 656
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr6g0321 - - gmx:100807886 740.725
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr6g0321 6 2603878 2607007 Tpr6g0321 6 2603878 2607007 ECH