Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr6g0318 ATGGGGCATTTTTCTTCTATGTTCAATGGTTTAGCAAGATCATTTTCACTAAAGAAAGGAAGAAATTCTGTGAGATGTGAAAGGAGAGAAGCTGTTGAAGAAATGGCTAAAGAAGCTAAGAAAAATGATTTGATTTTATGTAGCTCTGGCACGGTTAATGTTGATGGTTCAAACAATTTTGCCTCAGTTTTCTCCAAAAGAGGCCAGAAAGGAACCAACCAAGATTGTTGCATGGTGTGGGAGGAATTTGGATGCCAAGAGGACATGATATTTTGTGGGATATTTGATGGACATGGTCCATGGGGTCATTTTGTGGCCAAAAGAGTAAGAGAGTCAATGCCAAGATCTTTGCTATGCAATTGGCAAGAAACACTTGCTGCACAATCTTCATCACTTGATGATAATGTAAAAGATATTGATCAAGTAAAAGCAGCTGCAGACAACAAACAACAAAGATTCAATATTTGGAAACACTCTTACTTGAAAACTTGTGCTTCCATCGATCAAGAACTTGAGCATTGTCGAAAGTTTGACTCCTTTTACAGCGGAACAACTGCCCTCTCAATTGTTAGACAGGGTGAAACAGTTTTCATAGCAAATGTTGGCGATTCTCGTGCAGTATTAGCTACAACTTCAGACGATGGAAGTTTAGTTGCAGTTCAGCTAACGATCGATTTCAAGCCAAATTTACCTCAAGAGGCAGAGAGAATAACTCAGTGTCAAGGGCGTGTGTTCTGTTTAGAAGATGAACCTGGTGTGCATAGGGTATGGTTACCAGATGTTGAGTCTCCAGGACTTGCCATGTCAAGGGCTTTTGGAGATTATTGTATTAAACAATATGGTCTTATTTCAGTGCCTGAGGTAACTCAGAGGAATATAAGCAGTAATGATCAGTTTGTTGTGCTTGCTTCTGATGGGGTTTGGGATGTGATCTCTAACCAAGAAGCAGTAGATATTATATCTTCAACAGCAGATAAAGCAAAATCAGCTAAACGTTTGGTGGAATGTGCAGTGCATGCATGGAAACGCAAGAGGAGGGGCATTGCCATTGATGATATTTCAGCAATTTGTCTCTTTTTTCACTCTTCTTCTCTTTCCTCTGACCAAGTTAGCCCAATTACGCGCTAA 1128 0.3989 MGHFSSMFNGLARSFSLKKGRNSVRCERREAVEEMAKEAKKNDLILCSSGTVNVDGSNNFASVFSKRGQKGTNQDCCMVWEEFGCQEDMIFCGIFDGHGPWGHFVAKRVRESMPRSLLCNWQETLAAQSSSLDDNVKDIDQVKAAADNKQQRFNIWKHSYLKTCASIDQELEHCRKFDSFYSGTTALSIVRQGETVFIANVGDSRAVLATTSDDGSLVAVQLTIDFKPNLPQEAERITQCQGRVFCLEDEPGVHRVWLPDVESPGLAMSRAFGDYCIKQYGLISVPEVTQRNISSNDQFVVLASDGVWDVISNQEAVDIISSTADKAKSAKRLVECAVHAWKRKRRGIAIDDISAICLFFHSSSLSSDQVSPITR* 376
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr6g0318 375 ProSiteProfiles PPM-type phosphatase domain profile. 60 360 IPR001932 -
Tpr6g0318 375 SUPERFAMILY PP2C-like 55 361 IPR036457 -
Tpr6g0318 375 Pfam Protein phosphatase 2C 68 334 IPR001932 -
Tpr6g0318 375 SMART PP2C_4 51 358 IPR001932 -
Tpr6g0318 375 PANTHER ALPHABET, ISOFORM E-RELATED 1 368 - -
Tpr6g0318 375 CDD PP2Cc 59 360 IPR001932 -
Tpr6g0318 375 Gene3D - 46 363 IPR036457 -
Tpr6g0318 375 PANTHER CATALYTIC/PROTEIN PHOSPHATASE TYPE 2C 1 368 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr6g0318 Tpr-Chr6 2577292 2581059 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr6g0318 1 361 PP2C-type Phosphatase Gene Family AT3G05640 71.901 0.0 551
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr6g0318 - - gmx:100801309 632.098