Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr6g0304 ATGGCAGCAATGGAAGGAGTTATGGATAAAGCGATATTGGATGATGTGATTAGAAGATTGTTAGAAGGAAAAGGAGGAAAACAGGTTCAGCTTTCTGAATCTGAGATTCGTCAACTTTGCATCAACGCTAGACAAATTTTCCTCTCTCAGCCAATTCTTCTTGAGCTTCGTGCTCCCATTCGCGTTTGCGGTGATATACATGGTCAGTATCAAGACTTATTGAGACTTTTTGAATATGGCGGCTACCCTCCAGCTGCAAACTACTTGTTTCTCGGTGATTATGTTGACAGAGGGAAGCAAAGTTTGGAGACAATATGCTTGCTTCTGGCCTACAAAATAAGATACCCGGACAGAGTTTATCTCTTAAGAGGAAACCATGAAGATGCAAAGATAAACCGAATATACGGTTTTTATGACGAATGTAAAAGGAGGTTCAATGTCAGGCTATGGAAGATATTCACCGATTGCTTTAACTGTTTGCCGGTAGCTGCACTTATCGATGACAAAATACTTTGTATGCATGGAGGACTCTCTCCCGAACTAGAAAATTTAGATCAGATAAGAGAGGTTACAAGGCCTACCGAAATCCCAGATAACGGTCTCTTGTGTGATCTGCTTTGGTCTGATCCTGATGCTAGTACTGAGGGTTGGGCAGATAGTGACCGAGGCGTTTCGTGTACTTTTGGGCCTGATGTTGTTGCAGATTTTTTGGATAAAAATGATCTTGATCTTATTTGCAGGGGTCATCAGGTTGTGGAGGATGGATATGAGTTTTTTGCTAAACGAAGGTTAGTCACAATATTCTCTGCCCCGAATTATGGTGGGGAATTTGACAACGCCGGTGCATTATTGAGCGTTGATGAATCTCTTGTATGTTCCTTTGAGATACTGAAACCCGCTGATAAAGAGGGAGGTAGTTCATCGAAAATGAATTTTAAGAAGCCCCCTGCATTGGGATAG 960 0.4188 MAAMEGVMDKAILDDVIRRLLEGKGGKQVQLSESEIRQLCINARQIFLSQPILLELRAPIRVCGDIHGQYQDLLRLFEYGGYPPAANYLFLGDYVDRGKQSLETICLLLAYKIRYPDRVYLLRGNHEDAKINRIYGFYDECKRRFNVRLWKIFTDCFNCLPVAALIDDKILCMHGGLSPELENLDQIREVTRPTEIPDNGLLCDLLWSDPDASTEGWADSDRGVSCTFGPDVVADFLDKNDLDLICRGHQVVEDGYEFFAKRRLVTIFSAPNYGGEFDNAGALLSVDESLVCSFEILKPADKEGGSSSKMNFKKPPALG* 320
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr6g0304 319 PANTHER SERINE/THREONINE PROTEIN PHOSPHATASE 1 303 - -
Tpr6g0304 319 CDD MPP_PP1_PPKL 13 299 - -
Tpr6g0304 319 PRINTS Serine/threonine phosphatase family signature 59 86 IPR006186 GO:0016787
Tpr6g0304 319 PRINTS Serine/threonine phosphatase family signature 88 115 IPR006186 GO:0016787
Tpr6g0304 319 PRINTS Serine/threonine phosphatase family signature 121 145 IPR006186 GO:0016787
Tpr6g0304 319 PRINTS Serine/threonine phosphatase family signature 155 181 IPR006186 GO:0016787
Tpr6g0304 319 PRINTS Serine/threonine phosphatase family signature 184 211 IPR006186 GO:0016787
Tpr6g0304 319 PRINTS Serine/threonine phosphatase family signature 241 261 IPR006186 GO:0016787
Tpr6g0304 319 PRINTS Serine/threonine phosphatase family signature 263 279 IPR006186 GO:0016787
Tpr6g0304 319 PANTHER SERINE/THREONINE-PROTEIN PHOSPHATASE 1 303 - -
Tpr6g0304 319 Pfam Calcineurin-like phosphoesterase 59 251 IPR004843 GO:0016787
Tpr6g0304 319 Pfam Serine-threonine protein phosphatase N-terminal domain 13 57 IPR031675 -
Tpr6g0304 319 SUPERFAMILY Metallo-dependent phosphatases 11 302 IPR029052 -
Tpr6g0304 319 SMART pp2a_7 31 301 IPR006186 GO:0016787
Tpr6g0304 319 ProSitePatterns Serine/threonine specific protein phosphatases signature. 122 127 IPR006186 GO:0016787
Tpr6g0304 319 Gene3D - 5 308 IPR029052 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr6g0304 Tpr-Chr6 2475071 2478568 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr6g0304 60 247 Calmodulin-binding Proteins AT5G63870 34.978 6.05e-34 124