Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr6g0301 ATGAGTCGCGGTGGTGTTGCCGGAGCTAAAGGAAAGAAGAAGGGTGCAACCTTCACCATTGACTGTGCTAAACCAGTCGAAGATAAGATCATGGACATTGCTTCTCTTGAGAAGTTTCTTCAAGAGAGGATTAAGGTCGGTGGTAAAGCCGGTGCTCTCGGTGATTCCGTCACCGTTACCAGGGACAAGTCTAAGATCACTGTTACCTCTGACAGTAACTTTTCCAAGAGATATTTGAAGTATTTGACAAAGAAATACTTGAAGAAACACAATGTAAGAGACTGGCTCAGAGTGATTGCTTCAAACAAAGATAGGAGTGTCTATGAGTTGAGGTACTTCAACATTGCCGAGAACGAGGGAGAGGAAGAGGATTAA 375 0.4373 MSRGGVAGAKGKKKGATFTIDCAKPVEDKIMDIASLEKFLQERIKVGGKAGALGDSVTVTRDKSKITVTSDSNFSKRYLKYLTKKYLKKHNVRDWLRVIASNKDRSVYELRYFNIAENEGEEED* 125
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr6g0301 124 Gene3D - 6 124 IPR038526 -
Tpr6g0301 124 PANTHER 60S RIBOSOMAL PROTEIN L22 1 124 IPR002671 GO:0003735|GO:0005840|GO:0006412
Tpr6g0301 124 PANTHER 60S RIBOSOMAL PROTEIN L22-2 1 124 - -
Tpr6g0301 124 Pfam Ribosomal L22e protein family 14 122 IPR002671 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr6g0301 Tpr-Chr6 2429666 2431177 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr6g0301 1 124 Cytoplasmic Ribosomal Protein Gene Family AT3G05560 87.903 1.87e-68 200
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr6g0301 6 2429666 2431177 Tpr1g1424 1 12998722 13003486 PCT