Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr6g0267 ATGCAAGACATTTTCGGATCAGTTCGCCGGTCACTAGTCTTCCGTCCATCACCGGAGACAACCGAAGATCATTCACTCGGAGGAACAACCCTAGTTGATAAGATCGGTTACTGTATTCGTAATTCTAGAGTTTTCTCTAAACCTTCACCACCGTCTCCTCCGATTCCTAAAGAAACTGTCCCTCAAATCCGATGGCGAAAAGGCGAATTAATCGGTTGTGGTGCTTTTGGTCAAGTTTATGTTGGAATGAATCTCGATTCTGGAGAGCTTCTTGCTGTTAAACAGGTTTTGATTGCAGCAAGTAGTGCTTCGAAGGAGAAGGCACAGGCTCACGTAAAAGAGCTAGAGGAAGAAGTTAAACTGCTTAAAGATCTTTCGCATCCCAACATTGTTAGATATTTGGGTACGGTCAGAGAAGAAGATACCTTAAATATTCTCCTTGAGTTTGTTCCTGGTGGATCCATATCTTCACTGTTGGGGAAGTTTGGAGCTTTTCCTGAGGCCGTCATAAGAACTTACACGAAGCAGATATTACTTGGACTCGAGTACTTGCACAAAAATGGAATCATGCACAGGGACATTAAGGGGGCCAATATTCTTGTAGATAATAAAGGATGCATAAAAGTAGCAGATTTTGGAGCATCCAAACAGGTCGTTGAGCTGGCCACCATTTCTGGTGCCAAGTCTATGAAGGGTACTCCATATTGGATGGCTCCTGAAGTTATTCTCCAGACTGGGCATAGCTTCTCTGCTGACATATGGAGCGTGGGTTGTACTGTGATTGAGATGGCCACGGGAAAGCCTCCTTGGAGCCAGCAATACCAACAAGAGGTTGCTGCTCTCTTCCATATAGGGACAACTAAGTCTCATCCACCAATTCCTGATCATCTCTCGGCTGGAGCAAAAGATTTCCTGCTAAAGTGCTTGCAGAAGGAACCAATTTTGAGGCTATCAGCATCAGAACTGCTGCAGCATCCCTTTGTTACTGGTCAAAATATGGATTCGATTTCTCATTCATCTACTGCCATGGGAAGTTTTAGAGCATCTTCACCATCATGTGCTCCAAATGTTGAATCCTTACTTTGCTCAACAGAAAATCCTCAGGACTCAGGAAATAATCATGTATGGGGAATGAACAATGATGATGACATGTGTGAGATTGATGACAAAGAAGAGTTCTCAGAGTGTAATATCAAATACAAATCATTAATGTCAGATAATATTGAGAGTTTTAACCCGATGTCTGAACCCTTGGATGATTGGGGCTGTAAATTTGACGCAAGTCCAGTACTGGAAAATAGAGAAGTTAGTTTGGACAATGATGAAAGTCACATGCCATGTGTTCAATTAGAGTCCAATAAGGAACAGAAAGATTTACCCTTTCCATGTGTGCCATCTCTGTCAGAAGACGATGATGACCTAACAGAGGTCAAAATTAAAGCCTTTCTGGATGAGAAGGCACTTGAACTGAAAAAACTGCAGACACCTTTATATGAAGAGTTTTTCAACAGTTTAAATGCATCTTGTTCTCCCAATGTGATTGATAGCCCAAGTGATGATACCCCTGATAAAAAATACTTGAAATTACCTCCTAAAAGCAAGTCACCAAGTCGGATGCCAATTAGCTCTCCATCTAAACCAGTTGACAATGCTGTAAGTCCTGGAAGTAATGGCAGGTCCTCAGCAACTGTTGGCAATGTAAATAGTCATGGTTCACAGGATGTTCCAGCATCTCCCATTAATGAACGGAAAGGAATGGTAGTTGACTCCCAGCAGGAGCCCTTTAGCCCAAGTTTAAGCTTTTCCGAGAGACAGAGGAAGTGGAAAGAAGAGCTCGACCAGGAGCTTGAGAGAAAACGAGAAATGATGCGCCAAGCCAATACGACGGGAAAGACATCTTCACCAAAGGATCGAGCTTTAAATCGACCGAGAGAAAGGACAAGATTTGCTTCTCCCAGCTAA 1962 0.4281 MQDIFGSVRRSLVFRPSPETTEDHSLGGTTLVDKIGYCIRNSRVFSKPSPPSPPIPKETVPQIRWRKGELIGCGAFGQVYVGMNLDSGELLAVKQVLIAASSASKEKAQAHVKELEEEVKLLKDLSHPNIVRYLGTVREEDTLNILLEFVPGGSISSLLGKFGAFPEAVIRTYTKQILLGLEYLHKNGIMHRDIKGANILVDNKGCIKVADFGASKQVVELATISGAKSMKGTPYWMAPEVILQTGHSFSADIWSVGCTVIEMATGKPPWSQQYQQEVAALFHIGTTKSHPPIPDHLSAGAKDFLLKCLQKEPILRLSASELLQHPFVTGQNMDSISHSSTAMGSFRASSPSCAPNVESLLCSTENPQDSGNNHVWGMNNDDDMCEIDDKEEFSECNIKYKSLMSDNIESFNPMSEPLDDWGCKFDASPVLENREVSLDNDESHMPCVQLESNKEQKDLPFPCVPSLSEDDDDLTEVKIKAFLDEKALELKKLQTPLYEEFFNSLNASCSPNVIDSPSDDTPDKKYLKLPPKSKSPSRMPISSPSKPVDNAVSPGSNGRSSATVGNVNSHGSQDVPASPINERKGMVVDSQQEPFSPSLSFSERQRKWKEELDQELERKREMMRQANTTGKTSSPKDRALNRPRERTRFASPS* 654
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr6g0267 653 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE KINASE KINASE NPK1 1 614 - -
Tpr6g0267 653 Coils Coil 605 629 - -
Tpr6g0267 653 PANTHER MAP KINASE KINASE KINASE SSK2-RELATED-RELATED 1 614 - -
Tpr6g0267 653 Pfam Protein kinase domain 66 328 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr6g0267 653 ProSitePatterns Protein kinases ATP-binding region signature. 71 94 IPR017441 GO:0005524
Tpr6g0267 653 SMART serkin_6 65 328 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr6g0267 653 CDD STKc_MAPKKK 64 328 - -
Tpr6g0267 653 Gene3D Transferase(Phosphotransferase) domain 1 63 352 - -
Tpr6g0267 653 MobiDBLite consensus disorder prediction 513 653 - -
Tpr6g0267 653 ProSitePatterns Serine/Threonine protein kinases active-site signature. 189 201 IPR008271 GO:0004672|GO:0006468
Tpr6g0267 653 SUPERFAMILY Protein kinase-like (PK-like) 64 356 IPR011009 -
Tpr6g0267 653 ProSiteProfiles Protein kinase domain profile. 65 328 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr6g0267 653 Coils Coil 98 125 - -
Tpr6g0267 653 MobiDBLite consensus disorder prediction 536 576 - -
Tpr6g0267 653 MobiDBLite consensus disorder prediction 603 625 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr6g0267 Tpr-Chr6 2163074 2168796 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr6g0267 1 652 MAP Kinase Kinase Kinase AT1G54960 55.983 0.0 677
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE11 Tpr6g0267 Pkinase 5.6e-72 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr6g0267 K20606 - gmx:100807537 1016.14
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr6g0267 6 2163074 2168796 Tpr6g0267 6 2163074 2168796 ECH