Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr6g0251 ATGGATGGGATGTCAATGCCACCAAAATCATCATCAACCAATGGTACTACCATGATGATGATGCATATGACATTCTTTTGGGGTAAGGATGCTTTGATTCTCTTCAATGGTTGGCCTGCCGGTAACACTGCTAATTATTTGTTGGCATTGTTCATGGTTTTCGCCATGTCCATATTCATCGAGTTACTCTCCCACACCCGGTTCATCAAACCAGATTCCAACTCTACGGTGGCCGGTCTAGTTCAGACACTTTTGCACGTTCTTAGGGTTGGGTTAGCTTGTTTGGTTATGTTGGCTCTTATGTCTTTCAATGGTGGTGTGTTCTTGGTTGCTTTGCTTGGTCATGCTCTTGGATTTTTCTTTTATAGCCGTGCTTTCAAAAAACCACTTCATGATAAGCCTTATGATCTTCCTCCTATGGCTTGTTAA 429 0.4242 MDGMSMPPKSSSTNGTTMMMMHMTFFWGKDALILFNGWPAGNTANYLLALFMVFAMSIFIELLSHTRFIKPDSNSTVAGLVQTLLHVLRVGLACLVMLALMSFNGGVFLVALLGHALGFFFYSRAFKKPLHDKPYDLPPMAC* 143
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr6g0251 142 Pfam Ctr copper transporter family 74 121 IPR007274 GO:0005375|GO:0016021|GO:0035434
Tpr6g0251 142 Pfam Ctr copper transporter family 23 67 IPR007274 GO:0005375|GO:0016021|GO:0035434
Tpr6g0251 142 PANTHER SOLUTE CARRIER FAMILY 31 COPPER TRANSPORTERS 3 141 IPR007274 GO:0005375|GO:0016021|GO:0035434
Tpr6g0251 142 PANTHER COPPER TRANSPORTER 6-LIKE 3 141 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr6g0251 Tpr-Chr6 2065280 2065708 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr6g0251 24 142 Inorganic Solute Cotransporters AT5G59030 47.581 4.60e-34 115
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr6g0251 K14686 - gmx:100306175 186.808