Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr6g0219 ATGGAGTGCAACAAGGATGAGGCTCTGAGGGCGAAACAAATTGCTGAAAATAGAATGCAAAATGGCGACTTTGTAGGGGCACTGAAGTTTGCTAGAAAAGCTCAACGACTGTTTCCTGAGATCCAGAACATTACTCAGATCCTTACTGTCTGTGAGGTTCACTGTGCTGCACAGAACAAACTCTCTACTTCTGATATGGACTGGTATGGAATACTTCTGACTGATAAATTTACTGAAGAAGCAACAATAAAGAAACAGTACAAAAAGCTTGCACTGCTACTTCATCCTGATAAAAATAGATCCGCTGGGGCAGAGGCTGCTTTCAAATTGATTGTGGAAGCTAACAGGGTCTTGAGTGACCCAACAAAGCGTTCTTTATATAACGCGAAGATTAGCCGCCTTGTTGGAATTACAGCATCACAGGTTCCATCCCATCACACAGATAGGAGTTATTTTGGGGTGAAAGTTGATGAAAATGCTAGAAATTACCATAATAGTTTTCATTCCCATACTCATAATTCAAATCAACAGGATGAACGGCCTACATTTTGGACATCATGCCAACACTGTAATACTAAGTACCAGTACTACAGATCCATTGTAAATGCCACCGTGCATTGTCAACAATGTTCTAGACCCTTTAAAGCTCATGATATAGGGTTCTATGTACCAACAGAACATACATCACAATCATTTAACAGTCATAAATATCCTCCAAACCATGTGCCGCCAAAAGAAGCATCGAAAAGTAATGGCAGAAAACCTTATGGTAAAGGACCGGAGGAAAAAGTTGTGCCTTCTTGTCCTGTATATATGGCAAAATGTAGTGCTGGAAATGGTGCCTCTTGTAAAGTTCGGAAGAGTAAAGACGGCCATGGGGCTGCAGGAGTGACAAAGGCTGGTGCTGGAACATCCAATGGTGCAACATCCAAAGCCAAGCAATCACAAATCCCAACAAATGTTGGAAGTAAGAGAGCAAGGCAGCCAGCATCAGCAGAGTTTGAGAGTGCCTCCAAAAGGCCACAACAAGATAAATCATTTAAGTCTGTTAAAGTGGAGAAACAAGAAGTACCTGGAAATGGTGGGTTCAATAACACGAATCCAGCTAGTTTTACTGCCGATGTGGTTGATCAGAATGGAGAGATAAGAAATAAAGCAAATGCCCAACCCGAAAAAACAGATTTAAGGAAACAAATGAAATCGAATATTGATGATACAAAGGCCAAAGCTGAAAATTCTCAACTGAAATCGAATCTCCCTCCTGATGATGTTATTAGCTGTCCTGATCCAGATTTCAGTAATTTTGACAAGATAAAGACAGAGGATTCATTTGCTGATAATCAATTCTGGGCTATTTATGATGATACTGATTGTATGCCAAGATTCTACGCTCACATCAAGAAGGTGCACTCCCCTTTCAAGCTGGAATATACTTGGCTGGAACCTAATCCGAACCACAAAGATGAGATTGATTGGTATGATGCAGGTTTGCCTGTTGCATGCGGTAAGTACAGACTCGGTCATTCTCAGAAAACTAGAAATTGCGGTATGTTCTCTCACCAGGTGCATTGCACAAAAGGAAGTGCTAGAGGTTCTTATCTGGTATATCCCATGAAGGGAGAAACTTGGGCAATTTTCAGACATTGGGATATAGGATGGAGTTCCAATCCAGAAAAGAATTCAGAATATCAATTTGAATATGTGGAAGTCCTATCTGATTTTGATGAGAAAGATGGTGTTAAAGTTGCTTATCTCAGGAAAGTGAAAGGGTTTGTTAGTCTCTTTCAGCAAACTGTGCAGAATGGAATTGGCATATTTTGTATTCCATCTAAGGAGTTGTATAGGTTTTCACACCGGGTTCCTTCATTTACAATGACTGGTAATGAAAGGGAAGACGTTCCAAGAGGATCGTTTGAACTTGACCCTGCTGGCCTGCCTATGAGTGTTACTCGAGTTGAAGTAGGCGATCCTAGTGATGTGAAGATGAAGGTTGAAAAGTTAAACAATGTAGTCAGTTCTTGCCAGGAATCCTCCAAGCGTAAAGTTGAACAGGCAAAGTCAAATGAGCGTGTTCACAAAGCAAAGTTGCGAGAGAGTAAATGTACTGAAAGAGTTCCACCAATCATTAGAAGATCGTCAAGGTCAAATGTGAAAAGTATGGACAATGGTCAAGCAAGCACTAGTCAAAATATGGTCAGAGAGGATGACAAAAACAATAGCCAAAGGGACTACAGTCAACCGGAAGGAAGTGAAGCTGCTACAATTCAGACCAATAAGAATTTCAAAACACCAAAGAAATCTGAGAAGAGAAATTATCATGGAGAGACATTGACAGTTCCAAGATCACCTATAGATTTAAGAAAAAAAATTGATGTAGGAGGTGCTGGTGAATGTGCAACTGGCAAGTTGACTGATGATCATTCTAACACTAGCAATAATATTAAGGAAACTGTGTCTTCTCGGTCTGTGGGAAATGATAGTGCACGTTTGAAAAAAGATTCTGGAGTTGTGGGAGCATGTTATGACTTTAATAAGGAAAAATCTAGGGAGATGTTTCAGTGTGGTCAGATATGGGCAATATATGGTGATAGAGATGGTATGCCTGATGTTTATGTTCAAATCAAGAAGATTGGATCCACCTCTAATTTAAGGCTGCATGTATCTGAACTTGAACCCTGCTCGCCACCAAAAGGCTTGAAACAAACAATATCATGTGGCTCCTTCAAAATTAAAAAAGCCAAACTCCAAATTCTCTCTCCCTCTGCGTTCTCTCATCCACTAAAAATTGAACCCATGGAAAATAGCATATATGAAATTTACCCTAAAAAAGGTGAGATTTGGGCACTATACAAGGATCAGAACTATGAACTTACTTCTTCAAACCAGGGCAGAGGTGAATGTTATATAGTAGAAGTATTAGCAGAAAGTGACAAGTGTATACAAGTTGTTGTTCTGGTGCGTCTTAACGGATCTCAGCCAATTTTCAAGGCTCCCATTATTCGGCGATCTAAGACCAGTATACTTGAAATATTAAGAGAAGAGGTTGGTAGATTTTCACATCAGGTTCATGCTTTTCAGCCCAGTGGGAAAGATGATGTTCATCTCAGTGGATGTTGGGTGGTCAATCCTTCCTCAATTCCTGGTTTTTCATACACTTAG 3159 0.4014 MECNKDEALRAKQIAENRMQNGDFVGALKFARKAQRLFPEIQNITQILTVCEVHCAAQNKLSTSDMDWYGILLTDKFTEEATIKKQYKKLALLLHPDKNRSAGAEAAFKLIVEANRVLSDPTKRSLYNAKISRLVGITASQVPSHHTDRSYFGVKVDENARNYHNSFHSHTHNSNQQDERPTFWTSCQHCNTKYQYYRSIVNATVHCQQCSRPFKAHDIGFYVPTEHTSQSFNSHKYPPNHVPPKEASKSNGRKPYGKGPEEKVVPSCPVYMAKCSAGNGASCKVRKSKDGHGAAGVTKAGAGTSNGATSKAKQSQIPTNVGSKRARQPASAEFESASKRPQQDKSFKSVKVEKQEVPGNGGFNNTNPASFTADVVDQNGEIRNKANAQPEKTDLRKQMKSNIDDTKAKAENSQLKSNLPPDDVISCPDPDFSNFDKIKTEDSFADNQFWAIYDDTDCMPRFYAHIKKVHSPFKLEYTWLEPNPNHKDEIDWYDAGLPVACGKYRLGHSQKTRNCGMFSHQVHCTKGSARGSYLVYPMKGETWAIFRHWDIGWSSNPEKNSEYQFEYVEVLSDFDEKDGVKVAYLRKVKGFVSLFQQTVQNGIGIFCIPSKELYRFSHRVPSFTMTGNEREDVPRGSFELDPAGLPMSVTRVEVGDPSDVKMKVEKLNNVVSSCQESSKRKVEQAKSNERVHKAKLRESKCTERVPPIIRRSSRSNVKSMDNGQASTSQNMVREDDKNNSQRDYSQPEGSEAATIQTNKNFKTPKKSEKRNYHGETLTVPRSPIDLRKKIDVGGAGECATGKLTDDHSNTSNNIKETVSSRSVGNDSARLKKDSGVVGACYDFNKEKSREMFQCGQIWAIYGDRDGMPDVYVQIKKIGSTSNLRLHVSELEPCSPPKGLKQTISCGSFKIKKAKLQILSPSAFSHPLKIEPMENSIYEIYPKKGEIWALYKDQNYELTSSNQGRGECYIVEVLAESDKCIQVVVLVRLNGSQPIFKAPIIRRSKTSILEILREEVGRFSHQVHAFQPSGKDDVHLSGCWVVNPSSIPGFSYT* 1053
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr6g0219 1052 MobiDBLite consensus disorder prediction 743 761 - -
Tpr6g0219 1052 MobiDBLite consensus disorder prediction 679 707 - -
Tpr6g0219 1052 PRINTS DnaJ domain signature 69 87 IPR001623 -
Tpr6g0219 1052 PRINTS DnaJ domain signature 87 102 IPR001623 -
Tpr6g0219 1052 PRINTS DnaJ domain signature 103 123 IPR001623 -
Tpr6g0219 1052 Pfam DnaJ domain 67 128 IPR001623 -
Tpr6g0219 1052 MobiDBLite consensus disorder prediction 302 326 - -
Tpr6g0219 1052 PANTHER DNAJ HEAT SHOCK AMINO-TERMINAL DOMAIN PROTEIN 1 660 - -
Tpr6g0219 1052 PANTHER DNAJ HEAT SHOCK AMINO-TERMINAL DOMAIN PROTEIN 841 1047 - -
Tpr6g0219 1052 PANTHER - 841 1047 - -
Tpr6g0219 1052 PANTHER - 1 660 - -
Tpr6g0219 1052 CDD DnaJ 67 120 IPR001623 -
Tpr6g0219 1052 SUPERFAMILY Chaperone J-domain 61 130 IPR036869 -
Tpr6g0219 1052 Pfam Domain of unknown function (DUF3444) 424 629 IPR024593 -
Tpr6g0219 1052 Pfam Domain of unknown function (DUF3444) 840 1029 IPR024593 -
Tpr6g0219 1052 SMART dnaj_3 66 123 IPR001623 -
Tpr6g0219 1052 Gene3D DnaJ domain 52 143 IPR036869 -
Tpr6g0219 1052 MobiDBLite consensus disorder prediction 294 349 - -
Tpr6g0219 1052 MobiDBLite consensus disorder prediction 678 780 - -
Tpr6g0219 1052 MobiDBLite consensus disorder prediction 230 262 - -
Tpr6g0219 1052 MobiDBLite consensus disorder prediction 712 734 - -
Tpr6g0219 1052 Coils Coil 396 416 - -
Tpr6g0219 1052 ProSiteProfiles dnaJ domain profile. 67 131 IPR001623 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr6g0219 Tpr-Chr6 1784616 1790205 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr6g0219 4 219 SUVH1 or 3-interacting DNAJ domain-containing protein superfamily AT2G01710 32.883 6.90e-28 114
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr6g0219 - - mtr:MTR_7g114150 1503.03
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr6g0219 6 1784616 1790205 Tpr6g0219 6 1784616 1790205 ECH
Tpr6g0219 6 1784616 1790205 Tpr1g1500 1 13792195 13792881 PCT