Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr6g0212 ATGGGATGTGTGATTAGTCACCAATCCAAATCTGGAAGAATATCTCAAAACAAAGTTGATGGAGGATCCACGTCGACGGTGAAGAAGAAGAAGAAGAAGAATGGTGTGAGGGACAATGCTGATGATGATAGGGTTCAACAACCGTCTCAAGGTGGCGAAACTAGAAGAAGATCAAAACCGAATCCAAGGTTAAGTAATCCACCTAAGCATTTACATGGTGAACAGGTTGCTGCTGGATGGCCACCTTGGCTCACTGCAGTTTGTGGTGAAGCTCTTAGTGGTTGGATTCCGCGAAAAGCCGACACATTCGACAAAATTGATAAGATTGGGCAAGGAACTTATAGTAATGTGTACAAAGCTAAAGACTCGTTGACTGGTAAAATTGTTGCTCTGAAGAAGGTTCGATTTGACAATTTGGAACCTGAGAGTATTAAATTCATGGCTAGAGAGATTCTTATTCTGCGAAGGTTGGATCATCCAAATGTTATTAAGTTGCAAGGTTTAGTTACATCAAGGATGTCCTGTAGTTTGTATTTGGTGTTTGATTACATGGAGCATGATTTAGCTGGACTTGCTGCAAGCCCGGTAATCAGGTTTACACAGCCTCAGATAAAATGTTACATGCGTCAGCTGTTATCGGGACTTAAGCATTGTCATAACCGTCATGTACTTCACCGTGATATTAAAGGATCAAATCTTCTTATTGACAATGAAGGAATACTTAAGATTGCTGACTTTGGATTGGCATCCTTTTTCGATCCAAACCATAGGCATCCGATGACTAGTCGTGTAGTAACACTTTGGTATCGGCCTCCTGAGTTGCTTCTTGGTGCCACAGATTATGGTGTGGGTGTAGACCTTTGGAGTGCTGGATGTATTCTAGGAGAGTTACTGGCTGGAAAACCAATTATGCCCGGCCGTACAGAGGTGGAGCAATTGCATAAGATATACAAACTATGTGGTTCACCTTCTGATGAATACTGGAAGAAATCAAAGTTGCCCAATGCTACCTTGTTTAAACCTCGAGAGCCATACAAGAGATGCATAAGAGAGACATTCAAAGCTTTTCCACCGTCTGCTCTACCCCTTATTGATAATCTTCTTGCAATTGATCCTGTAGAACGGAAAACTGCATCGGATGCTTTAAGAAGTGAGTTCTTTGCCACAGAACCGTATGCTTGTGATCCTTCTAGTCTTCCAAAATACCCCCCAACCAAAGAAATGGATGTTAAAAGACGGGATGATGAAGTGAGGAGACAAAGAGCTGGAAGCAAAGCTCAGGTTGATGGTTCAAAAAAGCATCGTATACGTGAATGTGTTGTGAAAGCTATGCCTGCTCCCGAAGCCAACGCCGAGCTTCAATCCAATATTGATCAGAGAAGACGTCTAATCGGTCATGCAAATGCCAAGAGCAATAGTGAAAAGTTTCCTCCACCACATAAAGACGGACAATTTGGCTTTCCTTTGGGATCTTCGCATCATATTGATCCAGATACCATTCCTACCGACGTATCTTTCATTTCAACCAGATATACCTATTCAAAGGAACCATTCCAAGCTTGGTCGGGTCCAATTGGTAATGCTGCTGATATTGGAGTGCCGAAGCGGAAGAAACACACTGCAGGAGAGGCATGGGATTTATCAAAACCACAAAAAAGTGCCTCCAAGGATACATTTAAAGGAAAAGGAATTATAGTTTAG 1701 0.4221 MGCVISHQSKSGRISQNKVDGGSTSTVKKKKKKNGVRDNADDDRVQQPSQGGETRRRSKPNPRLSNPPKHLHGEQVAAGWPPWLTAVCGEALSGWIPRKADTFDKIDKIGQGTYSNVYKAKDSLTGKIVALKKVRFDNLEPESIKFMAREILILRRLDHPNVIKLQGLVTSRMSCSLYLVFDYMEHDLAGLAASPVIRFTQPQIKCYMRQLLSGLKHCHNRHVLHRDIKGSNLLIDNEGILKIADFGLASFFDPNHRHPMTSRVVTLWYRPPELLLGATDYGVGVDLWSAGCILGELLAGKPIMPGRTEVEQLHKIYKLCGSPSDEYWKKSKLPNATLFKPREPYKRCIRETFKAFPPSALPLIDNLLAIDPVERKTASDALRSEFFATEPYACDPSSLPKYPPTKEMDVKRRDDEVRRQRAGSKAQVDGSKKHRIRECVVKAMPAPEANAELQSNIDQRRRLIGHANAKSNSEKFPPPHKDGQFGFPLGSSHHIDPDTIPTDVSFISTRYTYSKEPFQAWSGPIGNAADIGVPKRKKHTAGEAWDLSKPQKSASKDTFKGKGIIV* 567
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr6g0212 566 MobiDBLite consensus disorder prediction 541 566 - -
Tpr6g0212 566 SUPERFAMILY Protein kinase-like (PK-like) 98 393 IPR011009 -
Tpr6g0212 566 MobiDBLite consensus disorder prediction 34 60 - -
Tpr6g0212 566 MobiDBLite consensus disorder prediction 397 434 - -
Tpr6g0212 566 SMART serkin_6 103 387 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr6g0212 566 ProSitePatterns Protein kinases ATP-binding region signature. 109 132 IPR017441 GO:0005524
Tpr6g0212 566 ProSiteProfiles Protein kinase domain profile. 103 387 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr6g0212 566 MobiDBLite consensus disorder prediction 405 434 - -
Tpr6g0212 566 PANTHER CELL DIVISION PROTEIN KINASE 42 543 - -
Tpr6g0212 566 MobiDBLite consensus disorder prediction 1 76 - -
Tpr6g0212 566 Gene3D Phosphorylase Kinase; domain 1 90 185 - -
Tpr6g0212 566 PANTHER OS01G0367700 PROTEIN 42 543 - -
Tpr6g0212 566 CDD STKc_CDK9_like 103 387 - -
Tpr6g0212 566 MobiDBLite consensus disorder prediction 8 23 - -
Tpr6g0212 566 Pfam Protein kinase domain 104 387 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr6g0212 566 Gene3D Transferase(Phosphotransferase) domain 1 186 427 - -
Tpr6g0212 566 ProSitePatterns Serine/Threonine protein kinases active-site signature. 223 235 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr6g0212 Tpr-Chr6 1731606 1736406 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr6g0212 95 427 Core Cell Cycle Gene Families AT5G10270 52.149 8.31e-121 364
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_CDK-CRK7-CDK9 Tpr6g0212 Pkinase 3.7e-66 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr6g0212 K08819 - gmx:100786837 954.125
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr1g1505 1 13849238 13855354 Tpr6g0212 6 1731606 1736406 ECH
Tpr6g0212 6 1731606 1736406 Tpr6g0212 6 1731606 1736406 ECH
Tpr6g0212 6 1731606 1736406 Tpr1g1505 1 13849238 13855354 PCT