Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr6g0205 ATGGCAAAAGTGGATCTGTCTAGGATATCTCTAAGACCATTCAAGCTAACAGATGTTGACGATTTCTTGTTATGGGCAGGGGACAATGAAGTAACCAAAAACCTCAGATGGAAAACATGCAATTCAAGGGAAGAAGCTCTAACATTCATCAGAGATGTCTGTATACCTCATCAATGGCGACGTTCGATTTGTCTCGACGATCGTTCAATCGGTTTTGTTTCGGTGTATTGATGGTCGGGTGATGATAGTTGCAAAGCTGATATAGGTTATGCTGTTGCTTCTAACTATTGGGGACAAGGGATAGCCACAAAAGCAATCAAAATTGCTTTGTCTCAAGTTTTTAATGATTTTTCTGATTTGTTAAGGTTGCAAGCTTTTGCTTATGTGGAGAACAAGGCTTCTCAAAGAGTTTTGGAAAAGGCTGGGTTCCTTAAAGAGGGTGTTCTTAGAAAGTATACTTTTATCAAAGGTACCGTTAAGGATTTGGCTGTGTTTAGTTTTTTGTCAACAGATGAAATTAATTTCTCTGAGGCTTTGATTGACTAG 546 0.3864 MAKVDLSRISLRPFKLTDVDDFLLWAGDNEVTKNLRWKTCNSREEALTFIRDVCIPHQWRRSICLDDRSIGFVSVY*WSGDDSCKADIGYAVASNYWGQGIATKAIKIALSQVFNDFSDLLRLQAFAYVENKASQRVLEKAGFLKEGVLRKYTFIKGTVKDLAVFSFLSTDEINFSEALID* 182
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr6g0205 180 Pfam Acetyltransferase (GNAT) domain 8 142 IPR000182 GO:0016407
Tpr6g0205 180 SUPERFAMILY Acyl-CoA N-acyltransferases (Nat) 7 167 IPR016181 -
Tpr6g0205 180 CDD NAT_SF 63 122 - -
Tpr6g0205 180 Gene3D - 4 167 - -
Tpr6g0205 180 PANTHER ACETYLTRANSFERASE (GNAT) DOMAIN PROTEIN 4 173 - -
Tpr6g0205 180 PANTHER ACYL-COA N-ACYLTRANSFERASES (NAT) SUPERFAMILY PROTEIN 4 173 - -
Tpr6g0205 180 ProSiteProfiles Gcn5-related N-acetyltransferase (GNAT) domain profile. 9 170 IPR000182 GO:0016407
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr6g0205 Tpr-Chr6 1682829 1683686 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR GNAT Tpr6g0205 Acetyltransf_3 3.1e-22 CL0257
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr6g0205 - - gmx:100527210 295.819
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr6g0205 6 1682829 1683686 Tpr6g0205 6 1682829 1683686 ECH