Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr6g0204 ATGGCTTCATCTCCATTGATTTTCACAGTTCGAAGGTCCCAACCAGAGTTGGTGCGTCCAGCTGCACCCACTCCTCGCGAAGTTAAACTACTATCTGACATAGATGATCAAGAGGGCCTCCGTTTCAATATTCCTTTGACATTTGTCTTTCGTCACGAATCATCAATGACAAAGAAAGATCCTATTAAAGTTCTTAGACATGCACTCTCTCAAACACTTGTTTATTACTATCCATTAGCGGGAAGAATTACTGAGGGAGCTGGGGGCAAGTTGATGGTGGATTGTAATGGTGAAGGTGTCATGTTCGTTGAAGCTGAAGCTGATGTAACGCTTGATCAATTTGGTGACTCTCTCCATCCTCCATTCCCTTGTTTTCAAGAACTTCTAAACGACGTTGAAGGCTCTGAACAAATTATTGACCGTCCCATTCGACTCATACAGGTGACACGTTTCAAGTGTGGTGGTTTCATGATAGCAATAAGTTGGAACCATACAAGTGGTGATGCAGCTGGTTTGAAACAATTCATGAATGCTTGGGCAGAAATGGCTCGAGGAGCACATCAACCTTCCATTCAACCTGTGTGGAATAGAGAGCTTTTAATGGCAAGAGACCCTCCACGCATTACATGCAATCATCGTGAATACGAACAAATTATACTTCCGCCAAATACCATCAAGAAAGAAGATACTACTGGTACCATAGTCCATCGATCTTTCTTCTTTTCACCTGCTCACATAGCTGCACTTCGTTGCTTGGTTCCGCTTCACCTTCGTCAATGCACAACATTTGATCTTATCACTGCATCCTTTTGGCGTTGCCGCACAAAAGCATTGCAATTAGAGCCAGATGAAGAAGTACGAATGATGTGCATCGTAAATGCACGTTCGAGGTTTACTCCAAACCAACAATCGTCACTTGTTGGATATTATGGTAACTTCTTTGCTTTCCCGGCGGCTGTCACCACCGCAGGGAAGCTTTGTGGAAACCCGCTAGGTTATGCAGTGGAATTGATACGAAAAGCAAAAGCTCAAGTTACAGAGGAATACATGCATTCTGTGGCAGATCTTATGGTTATTAAAGAACGATGTTTATTTACAACTATAGGGTCTTGTATTATTTCTGATCAAACTCGTGCTAAGTTTACAGAAGTGAATTTTGGATGGGGTGAGGCAGTGTATGGCGGAGTTGCAAAAGGCGGGGCTGGCCCTTTTCCTGGTGCAACATATATTGTCCCACATAAGAATGTAAATGGAGAAGAAGGTTTGATATTACCAATTTGTTTGTCCTCTGAAGATATGAAGAGGTTTGCTATAGAGTTAGATGAGATGCTTGGTAGCAAAAATCATCCTACAATGAGTAGTTCTAGTTTTATCATGTGTGCTTTGTAG 1389 0.4226 MASSPLIFTVRRSQPELVRPAAPTPREVKLLSDIDDQEGLRFNIPLTFVFRHESSMTKKDPIKVLRHALSQTLVYYYPLAGRITEGAGGKLMVDCNGEGVMFVEAEADVTLDQFGDSLHPPFPCFQELLNDVEGSEQIIDRPIRLIQVTRFKCGGFMIAISWNHTSGDAAGLKQFMNAWAEMARGAHQPSIQPVWNRELLMARDPPRITCNHREYEQIILPPNTIKKEDTTGTIVHRSFFFSPAHIAALRCLVPLHLRQCTTFDLITASFWRCRTKALQLEPDEEVRMMCIVNARSRFTPNQQSSLVGYYGNFFAFPAAVTTAGKLCGNPLGYAVELIRKAKAQVTEEYMHSVADLMVIKERCLFTTIGSCIISDQTRAKFTEVNFGWGEAVYGGVAKGGAGPFPGATYIVPHKNVNGEEGLILPICLSSEDMKRFAIELDEMLGSKNHPTMSSSSFIMCAL* 463
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr6g0204 462 Pfam Transferase family 13 439 - -
Tpr6g0204 462 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 8 446 - -
Tpr6g0204 462 Gene3D - 218 438 IPR023213 -
Tpr6g0204 462 Gene3D - 8 217 IPR023213 -
Tpr6g0204 462 SUPERFAMILY CoA-dependent acyltransferases 228 359 - -
Tpr6g0204 462 PANTHER ALCOHOL ACYLTRANSFERASE 8 446 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr6g0204 Tpr-Chr6 1676417 1680697 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr6g0204 17 443 Monolignol Biosynthesis Gene Families AT5G48930 31.151 9.29e-57 192
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr6g0204 K19861 - mtr:MTR_7g114490 690.263