Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr6g0203 ATGGCTTCATCTCCATTGATTTTCACAGTCCGGAGGTCCCAACCAGAGTTGGTGCGTCCAGCTGCACCCACTCCTCGCGAAGTTAAACTACTATCTGACATAGATGATCAAGAAGCCCTCCGTTTCAATCTTCCATTCATATTTGTCTTTCGTCACGAACCATCAATGACAAAGAAAAATCCTGTTAAAGTTCTTAAAGATGCACTCTCAAAAACACTTGTTTATTACTATCCAGGTGCAGGAAGGATTATGGAGGGAGCTGAGCGCAAGTTGATGGTGGATTGTACTGGTGAAGGTGTCATGTTCATTGAAGCTGAAGCTGATATAACACTTGATCAATTTGGTGATGCTCTGCAACCTCCATTCCCTTGTTTCCAAGAAATTCTACACGATGTTCCTGGCTCAGAAAAAATTATTGATCGTCCCATTCGACTCATTCAGGTCACACGTCTCAAATGTGGTGGTTTCATATTGGCCTTGAGTTTAAATCATACATTGGGCGATGCAGTTGGTTTAAGGCAATTCATACATGCCTGGACAGAAATGGCTCAAGGAGCAAATCAACCTTCCATTCAACCTGTGTGGTGTAGAGAGATCCTAATGGCAAGAGACCCGCCACAAATTACATGCAACCATCGTGAATACGAACAAATTACACTTCCTCCAAATACCATCAAGGAAGAAGATACTACTACCACAGTCCATCAATCTTTCTTCTTTACACCTGCTCACGTAGTTGCAATTCGTTGCTTGGTACCACTTCATCTACGTCAATGCACTGCATTCGATCTTATCGCTGCATGTTATTGGTACTGTCGCACAAAAGCATTACAGTTAAGGCCAGAGGAAGAGGTACGAATTATGTGCGTCGTTAATGCACGTTCGAGGTTTACTGATCGCTTGTCACTTGTTGGATATTATGGTAACTGTATTGCTTTCCCCGCGGCTGTCACTACCGCAGGGAAACTTTGTGGAAACCCACTAGGTTATGCAGTAGATTTGATAAGAAAAGCAAAAGCTCAAGTTACAGAGGAATACATGCATTCTGTGGCAGATCTTATGGTTATCAAAGAAAGATGTTCATTTACAGACTTAAGGTCTTCTATTGTGTCAGATTGGACTCGTGCTAAGTTTGCAGAAGTTGATTTTGGATGGGGCGGACCGGTGTATAGTGGCGCGGCTAAGGGTGGACTTGGATCTTTTTCTGGAGGAACTTTTATTGTCCCACATAAGAATGCAAAAGGAGAAGAAGGTTTGATATTACCAATTTGCTTGCCATATGAAGATATGAAGAGGTTTGCCAAAGAGTTAGATGAAATTCTTGCTAGCCAAAATCATGCTACAATAAGTGGATCTAGTTTTGTCACATCTGCTATATAG 1380 0.4203 MASSPLIFTVRRSQPELVRPAAPTPREVKLLSDIDDQEALRFNLPFIFVFRHEPSMTKKNPVKVLKDALSKTLVYYYPGAGRIMEGAERKLMVDCTGEGVMFIEAEADITLDQFGDALQPPFPCFQEILHDVPGSEKIIDRPIRLIQVTRLKCGGFILALSLNHTLGDAVGLRQFIHAWTEMAQGANQPSIQPVWCREILMARDPPQITCNHREYEQITLPPNTIKEEDTTTTVHQSFFFTPAHVVAIRCLVPLHLRQCTAFDLIAACYWYCRTKALQLRPEEEVRIMCVVNARSRFTDRLSLVGYYGNCIAFPAAVTTAGKLCGNPLGYAVDLIRKAKAQVTEEYMHSVADLMVIKERCSFTDLRSSIVSDWTRAKFAEVDFGWGGPVYSGAAKGGLGSFSGGTFIVPHKNAKGEEGLILPICLPYEDMKRFAKELDEILASQNHATISGSSFVTSAI* 460
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr6g0203 459 Gene3D - 8 215 IPR023213 -
Tpr6g0203 459 Pfam Transferase family 13 438 - -
Tpr6g0203 459 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 8 443 - -
Tpr6g0203 459 PANTHER ALCOHOL ACYLTRANSFERASE 8 443 - -
Tpr6g0203 459 Gene3D - 216 437 IPR023213 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr6g0203 Tpr-Chr6 1660473 1663847 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr6g0203 17 440 Monolignol Biosynthesis Gene Families AT5G48930 30.365 7.62e-56 189
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr6g0203 K19861 - mtr:MTR_7g114490 664.84