Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr6g0202 ATGAGTTCATCATCAATGTTCAACTTCAAAGTGCAGAGGTGCCAACCAGAATTGGTGCAACCAGCTGCACCTACTCCCCATGAAATAAAACTACTATCTGACATAGATAATCAAGAATGCCTACGTTTCAATATTCCTTTCATATTTATCTATCGTCATGAACCATCATCAATCATAGGGAAAGATCTTGTTAAAGTTCTTAGACATGCACTCTCAAAAACACTTGTTTATTACTATCCATTTGCAGGAAGGATTAGGGAGGGAGCTGGGGGCGAGTTGATGGTGGATTGTACCGGTGAAGGTGTCATGTTCGTCGAAGCTGAAGCTGATGTAACACTTGATCAATTTGGTGACTCTCTGCATCCTCCATTCCCTTGGTTTCAACAACTCTTAGATGATGATGTTCATGGAACCCAACAAATTATTGATCATCCCATTTTACTCATACAGGTGACACGTCTCAAGTGTGGTGGTTTTATTCTGTCCTTAAATATGAACCATGCAATTTGTGATGGAACTGGTTTGAAACAATTCATGAATGCTTGGGCAGAAATGGCTCGAGGAGCACATCAACCTTCCATTCAACCTATTTGGCATAGAGAGCTTTTAATGGCAAGAATCCCACCACGCGTTACATGCAACCATCGTGAATTCGAACAAATTATACTTCCTCCAAATACCATCAAGAAAGAAGATACTATTGGTACCATAGTCCATCAATCTTTCTTATTTACACGTGCTCACGTAGCTGCACTTCGTTGTTTGGTTCCACTTCATCTTCGTCAATGCACTACATTCGATCTTATCACTGCATGCTTTTGGTGTTGTCGCACAAAAGCATTGCAGTTAGAGCCAGAGGACGAAGTACGAATGATGTGTGCTGTTAATGCACGTTCTAGGTTGAGTGCTAACCATTCGTCACTTGTTGGATATTATGGTAACTGTTTTGCTTTCCCAGCAGCTGTTACTAGTGTTGGAAAGCTAATTTGTGGAAACCCATGTTATGCGGTGGAATTGATAAAAAAAGCAAAAGGCCAAGTTACTGAAGAATACATGCATTCTTTGGCGGATCTTATGGTTATTAAAGAAAGACATTTAGATACAACCATAAGGTCTTGTGTTGTATCAGACATGATCCGTGCTAAGTACACAAATGTGAATTTTGGGTGGGGCGATGCTGTGTATGGCGGAGTGGTAAAAGGCGGGGCTGGACCGTTTCCTGGAGCAACGTTTATAGTTTCACATAAGAATGCAAAAGAAGAAGAAGGTTTAATATTACTAACTTACTTGCCCTATGAAGATATGAAAAGGTTTGCTGAAGAGTTAGATAAGATGTTTGGTAACCAAAATCAACCTACAACGATTGGTCCTAGTTTTGTGATGTCTACTTTATAA 1395 0.4007 MSSSSMFNFKVQRCQPELVQPAAPTPHEIKLLSDIDNQECLRFNIPFIFIYRHEPSSIIGKDLVKVLRHALSKTLVYYYPFAGRIREGAGGELMVDCTGEGVMFVEAEADVTLDQFGDSLHPPFPWFQQLLDDDVHGTQQIIDHPILLIQVTRLKCGGFILSLNMNHAICDGTGLKQFMNAWAEMARGAHQPSIQPIWHRELLMARIPPRVTCNHREFEQIILPPNTIKKEDTIGTIVHQSFLFTRAHVAALRCLVPLHLRQCTTFDLITACFWCCRTKALQLEPEDEVRMMCAVNARSRLSANHSSLVGYYGNCFAFPAAVTSVGKLICGNPCYAVELIKKAKGQVTEEYMHSLADLMVIKERHLDTTIRSCVVSDMIRAKYTNVNFGWGDAVYGGVVKGGAGPFPGATFIVSHKNAKEEEGLILLTYLPYEDMKRFAEELDKMFGNQNQPTTIGPSFVMSTL* 465
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr6g0202 464 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 9 448 - -
Tpr6g0202 464 PANTHER ALCOHOL ACYLTRANSFERASE 9 448 - -
Tpr6g0202 464 SUPERFAMILY CoA-dependent acyltransferases 64 190 - -
Tpr6g0202 464 Gene3D - 224 442 IPR023213 -
Tpr6g0202 464 Pfam Transferase family 10 444 - -
Tpr6g0202 464 Gene3D - 5 220 IPR023213 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr6g0202 Tpr-Chr6 1655802 1658586 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr6g0202 10 442 Monolignol Biosynthesis Gene Families AT5G48930 28.571 2.43e-46 164
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr6g0202 K19861 - mtr:MTR_7g114490 615.535