Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr6g0201 ATGTACAACAAGTCACTCAAACTAAACACAACACTAATGAGTTCATCATCAATGTTCAACTTCAGAGTGCATAGGTGCCAACCAGAATTGGTGCAACCAGCTGCACCTACTCCTCATGAAATAAAACTACTATCTGACATAGATAATCAAGAATGTTTGCGTTTTTATTTTCCTATGATATTTATGTATCATCTTGAACCATCAATGACAAAGAAAGATCCTGTTAAAGTTCTTAGACATGCACTATCTCAAACACTTGTTTATTACTATCCATTTGCAGGAAGGATTAGGGAGGGAGCTGGAGGCAAGTTGATGGTGGATTGTAATGGTGAAGGTGTCATGTTCATTGAAGCTGAAGCTGATACAACACTTGATCAATTTGGTGACTCTCTGCATCCTCCATTCCCTTGGTTTCAACAACTCTTAGATGATGATGTTCATGGAACCCAACAAATTATTGATCATCCCATTTTACTCATACAGGTGACACGTCTCAAGTGTGGTGGTTTCATAGTGTCCTTAAATATAAACCATACAATTAGTGATGCAACTGGTTTGAAACAATTCATGAATGCTTGGGCAGAAATGGCTCGAGGAGCACATCAACCTTCAATTCAACCTATTTGGCATAGAGAGCTCCTAATGGCAAGAAACCCACCACACGTTACATGCAACCATCGTGAATTCGAACAAATTATACTTCCTCCAAACACCGTCAAGAAAGAAGATGCTACTACCATAGTCCATCAATCTTTCGTATTTACACCTGCTCACGTAGCTGCAATTCGTTGTTTGGTTCCAATTCATCTTCGTCAATGCACTGCATTTGATCTTATCACTGCATGCTTTTGGTGTTGTCGCACAAAAGCATTGCAGTTAGAGCCAAATGAAGAAGTACGAATGATTTATACGGTTAATGCACGTTCTAGGTTGAATGCTAACCAGTCGTCACTTGTTGGATATTATGGTAACTGTTCTGCTTTCCCGGTAGCTGTTACTAGTGCTGGAAATCTAATTTGTGGAAACCCATTAGGTTATGCAGTGGAATTGATAAAAAATGCAAAAGCCCAAGTTACTGAAGAATACATGCATTCTTTAGCTGATCTTTCGGTTATTAAAGAAAGATGTATATATAACACCATAAGGTCTTGTGTTGTATCAGACATGACCCGTGCTAAGTACGAAAATGTGAATTTCGGATGGGGTGAGGCTGTGTATGGCGGAGTGGTAAAAGGCGGGGCTGGACCGTTACCTGGAGCAACGTTTATAGTTCCGCATAAGAATGCAAAAGAAGGTTTAATATTACTAATAACTTGCTTGCCCTATGAAGATATGAAAAGGTTTGCTGAAGAGTTAGATAAGATGTTTGGAAACCAAAATCAACCTACAACTAGTGGTCCTAGTTTTGTGATGTCTTCTTTATAG 1425 0.3909 MYNKSLKLNTTLMSSSSMFNFRVHRCQPELVQPAAPTPHEIKLLSDIDNQECLRFYFPMIFMYHLEPSMTKKDPVKVLRHALSQTLVYYYPFAGRIREGAGGKLMVDCNGEGVMFIEAEADTTLDQFGDSLHPPFPWFQQLLDDDVHGTQQIIDHPILLIQVTRLKCGGFIVSLNINHTISDATGLKQFMNAWAEMARGAHQPSIQPIWHRELLMARNPPHVTCNHREFEQIILPPNTVKKEDATTIVHQSFVFTPAHVAAIRCLVPIHLRQCTAFDLITACFWCCRTKALQLEPNEEVRMIYTVNARSRLNANQSSLVGYYGNCSAFPVAVTSAGNLICGNPLGYAVELIKNAKAQVTEEYMHSLADLSVIKERCIYNTIRSCVVSDMTRAKYENVNFGWGEAVYGGVVKGGAGPLPGATFIVPHKNAKEGLILLITCLPYEDMKRFAEELDKMFGNQNQPTTSGPSFVMSSL* 475
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr6g0201 474 Pfam Transferase family 24 454 - -
Tpr6g0201 474 Gene3D - 17 230 IPR023213 -
Tpr6g0201 474 PANTHER ALCOHOL ACYLTRANSFERASE 21 458 - -
Tpr6g0201 474 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 21 458 - -
Tpr6g0201 474 Gene3D - 231 452 IPR023213 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr6g0201 Tpr-Chr6 1651476 1654095 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr6g0201 30 452 Monolignol Biosynthesis Gene Families AT5G48930 28.702 9.95e-47 166
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr6g0201 K19861 - mtr:MTR_7g114490 621.313