Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr6g0199 ATGATGAATTCATCACCATTAATGTTCACAGTGCGGAGGCGTCCACCAGTGTTGGTGCCACCGGCTGCTTCCACTCCTTCCGAAGTTAAACTACTATCCGATATAGATGATCAAGAAGGCCTACGTTTCAATATTCCTTTCATATATATCTATCGCCATGAACCATCAATAACGGGGAAAGATCCTGTTAAAGTTCTTAAACATGCACTCTCACAAACACTTGTTTATTACTATCCATTTGCAGGAAGGATTAGGGAGGGTGTCGGGCACAAGTTGATGGTTGATTGTACCGGTGAAGGTGTCATGTTTGTTGAAGCTGAAGCCGATGTAACACTTGATCAATTTGGTGACTCTCTGCAACCACCATTCCCTTGCTTCCAAGAACTTCTACATGATGTTGCAGACGCGGAATTAATTATCGACCGTCCCATTCGACTCATACAGGTCACACGTCTCAAGTGTGGTGGTTTCATACTAGTCTTGCATTTGAACCATATAATGAGCGATGGAGCTGGCACGAAACAATTCATGAATGCATGGACGGAAATGGCTCGAGGAGCACATCAACCTTCCATTCAACCTGTGTGGCGTAGAGAGATCCTAATGGCAAGAGACCCCCCACACATTACATGCAACCATCGTGAATACGAACAAATACTTTCGCCTATCAAGGAAGAAAATACTAACACCATAGTCCATCAATCTTTCTTCTTTAGATCTTCTGATATAGCTTCACTTCGTAGCTTGGTTCCACATCAATGTACTACGTTTGATGTTATCACTGCATGTTTTTGGTGTTGTCGCACAAAAGCATTGCAATTACAACCATATGAAGAGGTGCGAATGATGTGCATCGTCAATGCACGTCCAAGGTTTAGTGATAATCGTGCACTTGTCGGGTATTATGGTAACTGTTTTGCTTATCCAGCGGCCATCACCACTGCAGGGAAGCTTTGTGAAAACGGACTTGGTTATGCAGTGGAATTGATACGAAAAGTAAAAGTTGAAGTTACAGAGGAATACATGCAATCTGTGGCAGATCTTATGGTTACTAAGGAACGATGTTTATTTACAACTGTAGGATCTTGTGTTATTTCTGATTTGACTCGTGCAAAGTTCAGAGAAGTCGACTTTGGATGGGGTGAGGCAGTGTATGGCGGAGTTGCAAAAGGCGGGGCTGGCCCTTTTCCTGGTGCAACATATATTGTCCCACATATGAATGTAAATGGAGAAGAAGGTTTGATATTACCAATTTGTTTGTCCTCTGAAGATATGAAGAGGTTTGCTAAAGAGTTAGATGAGATGCTTGGTAGATGA 1317 0.4252 MMNSSPLMFTVRRRPPVLVPPAASTPSEVKLLSDIDDQEGLRFNIPFIYIYRHEPSITGKDPVKVLKHALSQTLVYYYPFAGRIREGVGHKLMVDCTGEGVMFVEAEADVTLDQFGDSLQPPFPCFQELLHDVADAELIIDRPIRLIQVTRLKCGGFILVLHLNHIMSDGAGTKQFMNAWTEMARGAHQPSIQPVWRREILMARDPPHITCNHREYEQILSPIKEENTNTIVHQSFFFRSSDIASLRSLVPHQCTTFDVITACFWCCRTKALQLQPYEEVRMMCIVNARPRFSDNRALVGYYGNCFAYPAAITTAGKLCENGLGYAVELIRKVKVEVTEEYMQSVADLMVTKERCLFTTVGSCVISDLTRAKFREVDFGWGEAVYGGVAKGGAGPFPGATYIVPHMNVNGEEGLILPICLSSEDMKRFAKELDEMLGR* 439
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr6g0199 438 Pfam Transferase family 18 434 - -
Tpr6g0199 438 PANTHER ALCOHOL ACYLTRANSFERASE 9 435 - -
Tpr6g0199 438 Gene3D - 7 214 IPR023213 -
Tpr6g0199 438 Gene3D - 215 432 IPR023213 -
Tpr6g0199 438 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 9 435 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr6g0199 Tpr-Chr6 1641944 1646789 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr6g0199 14 435 Monolignol Biosynthesis Gene Families AT5G48930 29.545 1.75e-49 172
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr6g0199 K19861 - mtr:MTR_7g114490 686.026