Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr6g0196 ATGGCTTCACAGCAACACGACACCGTTTTCCCCGATGAAGACATCGACGACGAAGACGAAGAATTTCACGAATACGAAGAAGAAGATGAAGAAGAAGAAGAAGACGTTTTAGTCGAAGAAGAAGAAAACGCTTCTATCTCCGCTCCCTCCGTCACCGTCGCCGTTCCCGGTTCCGCCATCTCCAACGGAGAAATCAGACCTCCAATTGTAACTCCAACCGCAACAACAATCGTTTTCGCAAACTCCTTCCCCGATTCAAAACGCCAACGTTTAGATCAAATTGAAGAAAAAAAACCTCCTCTCGAAGATTCACGTAAGCTTTTTCAACGTCTATGGACAGACGAAGACGAGATGGAACTCCTCCAAGGTTTTCTCGATTACACAACACAGAGAGGTTCCTCTCATCACAACGACACTGCTCAATTTTACGATCAAATCAAATCGAAACTCCAACTCGATTTTAACAAGAACCAGCTCGTTGAGAAGATCCGAAGGTTGAAGAAGAAATACCGAAACGTTCTAAACAAAATCAGTTCCGGTAAGGAATTTGTCTTCAAAACCGCTCACGATCAAGCTACTTTTGAAATCTCGCGCAAGATCTGGAACAACGTGGCGCCAATCGCCGGTGATATTGCTATTGACGATGAAGAAATCAATCTCAATCCTAGTCCCAACCCTAACCTCAATTTCACTCCCGTAATTCTCAAGTCTGAATCAACTTCGCATACGCGAAAGCGTTCACGGCCTCGATCTGTGATCAGAAGCTTCGAGAAACGTGAATCAAATGATGCAATTGCATCAATCAGAGATCGTGATTATCTCAATATCAACCTCAACAATCCTAATCCTAATTTTAATCCTAATCCTAATCCTATTGCTAATCCTATCATAGCTACTACTTCCGCTACTGTTAACACAGCAGCAACAACAGCACCTACAATTACTACTACTCCTAATACTAATCCTGCAATTAATGCTAATAATTATAGTAACAATTGTAGTAGTAACATTGGGAATAGTGTAGCAGGTGTGATTGAAGAGACAGTGAGGAGTTGTTTATCGCCGTTGTTGAAGGAATTGATGACCAGTGCGACAGGAGGACCGTTCGGAGCAAGAGGTGCCGGTGGTTTCGCGATGAATCCGTTGCAGTTGATGAATTTAGGTTATGGAGAAGTGGTGGATGAGAAATGGAGGAAGCAACAGATTTTGGAATTGGAAGTGTATTCAAAGAGACTGGAATTGGTTCAAGATCAGATCAAAGCATCTATTGATGAATTGCGTTCGGTTGGTGGATCAACCTTTTAG 1305 0.4261 MASQQHDTVFPDEDIDDEDEEFHEYEEEDEEEEEDVLVEEEENASISAPSVTVAVPGSAISNGEIRPPIVTPTATTIVFANSFPDSKRQRLDQIEEKKPPLEDSRKLFQRLWTDEDEMELLQGFLDYTTQRGSSHHNDTAQFYDQIKSKLQLDFNKNQLVEKIRRLKKKYRNVLNKISSGKEFVFKTAHDQATFEISRKIWNNVAPIAGDIAIDDEEINLNPSPNPNLNFTPVILKSESTSHTRKRSRPRSVIRSFEKRESNDAIASIRDRDYLNINLNNPNPNFNPNPNPIANPIIATTSATVNTAATTAPTITTTPNTNPAINANNYSNNCSSNIGNSVAGVIEETVRSCLSPLLKELMTSATGGPFGARGAGGFAMNPLQLMNLGYGEVVDEKWRKQQILELEVYSKRLELVQDQIKASIDELRSVGGSTF* 435
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr6g0196 434 Coils Coil 156 176 - -
Tpr6g0196 434 MobiDBLite consensus disorder prediction 11 41 - -
Tpr6g0196 434 Pfam Protein of unknown function, DUF573 108 202 IPR007592 GO:0006355
Tpr6g0196 434 MobiDBLite consensus disorder prediction 1 48 - -
Tpr6g0196 434 PANTHER BNAANNG10740D PROTEIN 1 430 - -
Tpr6g0196 434 PANTHER BNAANNG10740D PROTEIN-RELATED 1 430 IPR007592 GO:0006355
Tpr6g0196 434 Coils Coil 15 42 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr6g0196 Tpr-Chr6 1620032 1621971 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr6g0196 1 429 GeBP Transcription Factor Family AT5G28040 40.173 9.63e-93 285
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GeBP Tpr6g0196 DUF573 1e-33 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr6g0196 - - mtr:MTR_7g114600 495.352
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr6g0196 6 1620032 1621971 Tpr1g1523 1 14012403 14015138 PCT